Silurus meridionalis (southern catfish): 124400515
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Entry
124400515 CDS
T08004
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124400515 (apex2)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
124400515 (apex2)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
124400515 (apex2)
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
124400515
NCBI-ProteinID:
XP_046728370
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Position
17:complement(15720464..15726205)
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AA seq
580 aa
AA seq
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MKLVSWNINGIRTFRNGIKSALDAFDADIICVQETKVTRDLLDERTAIVDGYNSYFSFSR
GRTGYSGVATFCKDSATPLAAEEGLTGRLVNHTEAVGCYGDQGEFSIADLQSLDNEGRAV
ITQHKIKHSGEAEGSETLTVINVYCPRADPEKPERKLFKLQFYKLLQSRAEAIVGPKSHV
IILGDINTSHRPIDHCDPDDVENFEDNPGRKWLDSFLFSPAEKESDEDEGTEPAQNCVSG
GNFIDSFRYFHPTRTNAFTCWSSRTGARQTNYGTRIDYIFASRLLAEKHLLNSDIMPEVE
GSDHCPIWAKLSCTFVSSPRCPALCTCYMPEFMGKQQKLLRFLVKVSDQHNGVQNSERPL
PGSQEAGEIRENVNPSATGVSSENKRPSERLPESSTFKKSKLSKKTTKPQGSLLTFFKPK
LSPVVSSSQSLSSAGNSKTALKTGGITPEIHENTGNSNSCSATQSLLTDTRTEAIVNDEI
SNFGLTNNKKEECCQDPIQNATKPNQENKKGSCPDFWKSVLHGPPQPPLCNSHNEPCVLR
TVKKPGPNLGKQFFVCARPQGHTSNPQARCNFFAWVEKHK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgtcagttggaacataaacggcataaggacctttagaaacggcattaagtcg
gcgctggacgcgttcgacgctgatataatatgcgtgcaagagactaaagtgacgcgtgac
ctgctagacgagaggactgcaattgtggatggatacaactcttatttcagcttcagccgg
ggacgcactggatactcgggtgtcgcgacgttttgtaaagactccgccaccccattggct
gcagaagaaggactgacgggtcgccttgtcaaccacacagaggccgtcggttgctacggt
gatcagggagaattctccatagcggacctccaatcgcttgataatgaaggaagagccgtt
atcacccaacacaagatcaagcattcaggggaagcagagggatctgagacacttaccgtc
atcaatgtgtattgcccgcgtgcagatccagaaaagccagaaaggaagctttttaaactg
cagttttacaaactcctacagagcagagctgaggcgattgtggggcccaaaagtcacgtg
atcatcttgggcgatataaacacttctcatcggcccatagaccactgcgacccagatgat
gtggagaattttgaggataatccaggcagaaaatggttggacagcttcctgtttagcccg
gcagagaaggagagtgacgaggacgaaggtactgagcccgcacagaattgtgtgtctggc
ggtaattttattgactccttccgctatttccatcctacacgtaccaacgccttcacatgt
tggtcttcacgtactggtgctaggcaaaccaactatggcacccgcatcgactatatcttt
gccagtcgtttgctggctgagaagcatttactgaattcagacatcatgccagaagtggag
ggttctgatcactgtcccatatgggctaaattaagctgtacatttgtatccagtccgagg
tgccctgctctgtgcacctgttatatgcctgagttcatggggaagcagcagaaactcttg
cgctttcttgttaaggtttctgatcagcacaatggtgttcaaaacagtgaaaggcctttg
cctggatcgcaagaggctggggaaattcgtgagaacgtcaatccgtcagcaacaggtgtc
agttctgagaacaagagaccttcagagagactaccagagtcatcaacattcaaaaaaagc
aaactttctaaaaagacaactaaaccccagggcagtctattgaccttctttaaacctaaa
ctgagcccagtggtatcttcaagtcagagcctaagctcagcaggaaactctaagacagct
ttaaaaactggtggcatcacaccagagatccacgaaaatacaggaaacagcaacagctgc
tctgcaacccaaagcctgcttactgacaccagaactgaagcgattgtcaacgatgaaata
agtaactttgggttgacaaacaataagaaagaagagtgttgtcaggatccgatccaaaac
gccaccaaacccaatcaggagaacaagaaggggtcctgtcccgacttttggaaatcagtt
ttgcatggaccaccccagccgccgctgtgtaactcccacaacgagccatgtgtgctgcgg
actgtaaagaaacctggaccaaatttgggcaagcagtttttcgtatgcgcccgtcctcag
gggcacacatcaaatccacaggcaaggtgtaatttctttgcctgggtggaaaagcataag
tag
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