Silurus meridionalis (southern catfish): 124400516
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Entry
124400516 CDS
T08004
Symbol
arhgef16
Name
(RefSeq) rho guanine nucleotide exchange factor 16
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124400516 (arhgef16)
Membrane trafficking [BR:
smeo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124400516 (arhgef16)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_9
SH3_1
SOS1_NGEF_PH
SH3_2
PH
RHG20_PH
Peptidase_M99
Motif
Other DBs
NCBI-GeneID:
124400516
NCBI-ProteinID:
XP_046728371
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All DBs
Position
17:6926023..6937509
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AA seq
664 aa
AA seq
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MSHQQSQTSTGDKSPIMLDNMLSELHLDSQANSSSSNTDITLPVQPSRTDIILSTKSEAA
RRLGTQQLIPKNLAVTSRPKNRHHTTVVTLPVVKEAQKNIQRFSHNPEISWEDYDSDDGG
LQRNRRNKSYRAAVTSLDQDLTWKQDLLQPVIEEKEKTPSSKTVPSPGRKRTLGRKRNQK
NSGSFKDDPRLYQEIKERGLQSNNLGPDDDDFSQMPEEDQGIVVKTYKAAYMTWSQLPQV
KEMGILETITPEERKRQEVIFEIMTSEYSYLHSLAILVRHFKCNEALRKTMTTTEHHHLF
SNISTVYDVSKRFFEALERRHQVHPVVKDISDIVQDHATNRFEPYIVYCSNETFQQRTLQ
KLLTFNTAFKEVLKQIESSPECGALPMISFLILPMQRVTRLPLLVDTICQKTIKQTTEYY
AARWALKSISKLVKSCNDGARRMERTEQMYTIQKQMDFGKIKPFPLISSSRWLLKRGELA
VYTEEHGIFWKAFGHKSYYLFLFNDVLIVTRKKSDESYVVFDYATLENVEVEEQADKLCL
RLTMKHNSEGRCEQMALVAESKLERARWVTALRWFKQGESSPNKDALQYESTKAYMPKEP
DELSLQQAEVVVVLQEVDGWCYGDRMRDGEKGWFPASCATQITDPIAIECNILRMQRLRK
ETNV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaccaacaatcccaaacatccacaggggacaagtctcctattatgttggacaac
atgctctccgagcttcatctggattcccaggctaattcttcatcctcaaacacggacatc
actctacctgtgcagccttcacggactgatataatcctgagcaccaagagtgaagcagct
cggaggcttggaacacagcagctcatccccaaaaacctggctgtcactagtcgaccaaag
aaccgccaccataccacggtggtcacgctgcctgtggtcaaagaggcccaaaaaaacata
cagcgtttctctcataatcctgaaatctcctgggaggactatgacagtgacgatggtggc
ttgcaaaggaaccgcagaaacaagtcgtacagagctgcggtcactagtcttgatcaagat
ttgacttggaaacaggacctgctgcagcctgttatagaggagaaggagaaaacacctagc
tcgaaaacagtgcccagtcctggacgcaaaagaacccttggcagaaagaggaaccagaag
aatagtggatcatttaaagatgatccacggttataccaggagattaaggaaaggggtctc
cagtccaacaacctggggcctgatgatgatgatttcagccagatgccagaggaggaccag
ggcattgttgtgaaaacctacaaggcagcatacatgacctggagtcaacttcctcaggta
aaagagatgggtattctggagaccattacacctgaggagcgtaaacgtcaagaggtcatt
ttcgagattatgacgtctgaatactcctacctgcacagcttggctatcctggtgcgccat
ttcaaatgcaatgaggctttgaggaagaccatgaccacaactgaacaccatcacctcttc
tctaacatctccacagtctacgatgtcagcaagcgatttttcgaagctcttgaaaggcgc
catcaagttcatcctgtcgttaaggacatcagcgacatagtccaggaccacgcaacaaat
cgctttgagccatacattgtgtattgctccaacgagacgttccagcagaggacgctgcag
aaactacttacatttaatactgcctttaaggaggtgctgaaacaaattgaaagcagtcca
gaatgtggagcattgcctatgatctccttcctcattctgcccatgcagagagtcacccgt
ctgcccctgctggtggataccatttgtcagaagacaataaagcagacgactgaatactac
gcagctcgctgggcactgaagtccatcagtaagctggtaaagagctgcaatgatggcgcc
cgtagaatggagcgcaccgaacagatgtacaccatccagaaacagatggattttggaaag
ataaagccattccctttaatctcctcctctcgctggctgctgaagagaggcgagctggcc
gtgtacacagaggagcacgggatcttctggaaagccttcggccataagagctattacctt
ttcctgttcaatgatgtactcattgttaccaggaaaaaaagtgacgaaagctacgtggtg
tttgactatgccactctggagaacgtggaagttgaggagcaggctgacaagctctgtttg
cgtctgacgatgaaacacaacagcgaggggcgctgtgagcagatggctctggtggctgaa
agcaagctggaaagagctcgctgggtcactgctctgcgctggtttaaacagggagagtct
tctcctaacaaagatgcacttcaatatgaatccaccaaagcgtacatgcccaaagagcca
gatgagctgagcctccagcaagctgaagtggtcgtcgtcctacaggaagtggatggttgg
tgctatggggaccggatgagagatggagaaaagggatggtttccagccagttgtgctaca
cagattaccgaccccattgctatcgagtgcaacatactgcgcatgcagcgactgcggaaa
gagaccaacgtctga
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