Silurus meridionalis (southern catfish): 124400525
Help
Entry
124400525 CDS
T08004
Symbol
colgalt2b
Name
(RefSeq) procollagen galactosyltransferase 2 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00310
Lysine degradation
smeo00514
Other types of O-glycan biosynthesis
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124400525 (colgalt2b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
124400525 (colgalt2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smeo01003
]
124400525 (colgalt2b)
Enzymes [BR:
smeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
124400525 (colgalt2b)
Glycosyltransferases [BR:
smeo01003
]
O-Glycan biosynthesis
O-linked Gal type
124400525 (colgalt2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
124400525
NCBI-ProteinID:
XP_046728382
LinkDB
All DBs
Position
17:complement(24912346..24950497)
Genome browser
AA seq
634 aa
AA seq
DB search
MCFFFPLRHKSSAEAPAPAVMLTEPRALRLGVLCALQCALLCVSVDALLDLELVHPESAV
LKPRVMIAVLARNSAHSLPHFLGCIDRLEYPKDRVAIWAATDHNIDNTTAILKEWMKSAL
RRYHYVEWRPMEEPRSYTDEWGPKHWPLSRFNHVLKLRQAALEAARHRWADYILFVDSDN
LLTNPLVLDLLIAENRTLVAPMLESRSLYSNFWCGITSQGYYKRTPDYQPIREWRRQGCF
PVPMIHTTFLLDLRRSASRDLAFYPPHPDYSWAFDDIMVFAFSARQAGVQMFVCNKEHYG
FLPIPLKANQSLEDEEESFTHTITEALIDHQIKPSEFVFVSPKLQDKMEFDEIFLINLKR
RMDRRERMLNSLAALGVEATITNAVDGKALNSSQLQALGIEMMPNYKDPYSGRVLTRGEI
GCFLSHHSIWTQMVEKGLQRVLVLEDDVRFEPRFKRRLQTIMQDVEKVQLDWDLIYVGRK
RMQVAQPELSVDGVNNLVEADYSYWTLAYALSLNGANKLLSAQPFTCMLPVDEFLPIMFN
KHPNMAYMSHFERRDLRAFSVEPLLVYPTHYTGEPGYFSDTETSTIWDDEAIDTDWDRSH
AQKTAQQGRIRPIAQNSVTGEMPPPAARASRDEL
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttttttttcccgctgcgtcacaagagctccgctgaagcccctgctcccgcagtc
atgttgaccgagccgcgcgctctgaggctcggcgtgctgtgcgcgctccagtgcgcgctc
ctgtgcgtgtcggtggatgcgcttttggatctggaactggtgcatccggaatccgcggtg
ctgaagccgcgggtgatgatcgcggtgttggctcggaactctgcacacagcctgccgcac
ttcctgggctgcatcgaccgcctggagtacccaaaagaccgcgtggccatatgggcagca
acagatcataacatagacaacaccacggctattctaaaagagtggatgaaatcggcttta
agaagatatcactatgtggaatggagaccgatggaggagcctcgctcttatacagatgag
tgggggcccaagcactggccactgtcccggtttaaccacgtgcttaagctcagacaggct
gctctggaggcagcacgccaccgatgggccgactacatactgtttgtggacagtgataat
ctcctgaccaacccgctggtcttggacctcctgattgcggagaatcggactctggtggcg
cccatgttagaatcacggtctctctactccaacttctggtgtggcatcacttctcagggc
tactataagcgcaccccagattatcagcctatccgtgagtggaggcgtcagggctgcttc
cctgttcccatgattcacaccaccttcctgctggatttgagacgcagcgcctctcgcgat
ctggctttctaccctccacatcccgactacagctgggccttcgacgatatcatggtgttt
gctttttctgctcgccaagcaggtgtacagatgtttgtgtgtaataaggagcactatggt
ttcctacccattcctctgaaggccaatcaaagcttagaggacgaagaggaaagtttcaca
cacaccattactgaggccctcattgatcatcagattaaaccttcagagtttgtgttcgtt
tctccaaaactacaggataagatggaatttgatgagatcttcctgattaatctgaagcgg
cggatggatcggagggaacgcatgttaaattctctggctgctttgggtgtggaggccaca
atcaccaacgctgtggatggcaaggctttgaactcgtcgcagctgcaggctctggggatt
gagatgatgccgaattataaagacccatattcaggcagggtgctgaccagaggagagatc
ggttgcttcctcagccaccattctatatggacacagatggtggagaaaggtttgcaacgt
gttctagttctggaggatgatgtgagatttgagcccaggtttaaaaggaggctgcaaact
attatgcaggatgtggagaaagttcagctagactgggacctcatatatgtgggccggaag
cggatgcaggtggcacagcctgagctctctgtggatggagtgaataacctggtggaggct
gattactcgtactggacgctggcgtatgctctctctctaaacggagccaacaaactgctc
tcagctcagcccttcacctgcatgctgcctgtggatgagttcctgcccatcatgttcaac
aaacaccccaacatggcctacatgtcccattttgagcggagagatttgcgagcgttctca
gttgaaccgttgctggtttacccgacacactacacgggcgagccgggttacttcagcgac
actgagacatccacaatctgggacgatgaggccatagatacggactgggaccgatctcac
gctcagaaaactgctcaacaaggccgaatccggcccatcgcccagaacagcgtgactgga
gaaatgccgccccctgctgctcgtgcatcacgagacgaactctga
DBGET
integrated database retrieval system
