Silurus meridionalis (southern catfish): 124400530
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Entry
124400530 CDS
T08004
Symbol
ttc7a
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 7A
KO
K21843
tetratricopeptide repeat protein 7
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124400530 (ttc7a)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
124400530 (ttc7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC7_N
TPR_14
TPR_2
TPR_8
TPR_16
TPR_11
TPR_19
ANAPC3
TPR_CcmH_CycH
TPR_9
TPR_20
TPR_1
Motif
Other DBs
NCBI-GeneID:
124400530
NCBI-ProteinID:
XP_046728391
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Position
2:23053504..23084585
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AA seq
877 aa
AA seq
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MLSAHVALPVRQCAVSPRVSEGPRELGGMSARLSLSLYRLEAEIERCRAECQWDRIPALV
EQLAAARFHEDDDYGLLLQAEALLEECLLENVALLRSSTCLSEQTQPKLAQAKSHLNNLL
SRGRLEPRYLNEALLLQAKVHYAQGHYRDSQGMVARAGIEEFTQDEQPLYHLRLLAEAFV
IKGLSLDHQTVSAASRVRLSEREEECLSCYLRACDTALLYLQKLDKAVCSATNKAAKSGG
SACLAEVDPGYFLQAALQSAYLCLLQKGHLVQGTNQLRQVLRVVDSHGSQNFRKTVARKL
AEVLLSSVSEXSYWGPLSPPPPTWLHKEGATHPKDAIYPSSRPPQYYNTEGAFCPQDVVE
EAVLLLLITESMASGEAVISRTPEHKEAREASIQDASTVYDLLSIGMARRGQYAMLSECL
ERAMKFSFNEYHLWYQLGLSLMACGKNEGAVSVLKECTKMKPQDPIPPLLAAKVCINQLH
WLDEAETLAKGVVALGEGAEESLARAHLTVGLCYSLQASDAMLKGERDKFNRRALQALQT
AHSLDPQDAQIALYLALQLALVRQVSAAMEPLQLALKLRSDDLHSLHLLVLLLSAQKHYQ
HALDTLTLTISQYPDNVNLLFTKVKLEEALFGPAVALQTCEEMLHLWQNCYDIARPSETD
DSSSIPPPEPGPLNRKPSGLHLALPDFQETETGSQSAPSLAVSRLEQVMSEVSAVSSTQR
HGPAHIWTTLERIWLQAGELFMADGRLKEAQFCVQEAGALFPTSHSVLLLKGRLAERRGN
DTEAKTLYDEALAINPTGHHILIHLGKLLVRMGRVGLGEKVLRDAVQTHSLAHEAWSGLG
EALQSRGSTQAPDCFLTALELESSCPIRPFSIIPREL
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtgctcacgtcgctctgcccgtgcgccagtgtgcagtcagtccgcgggtgtcg
gagggaccgcgggagctcggcggcatgtctgcgcgcctctcgctgtctctgtaccgcctg
gaagccgagatcgagcgctgcagagccgagtgccagtgggacaggatcccggctctggtg
gagcaactcgcagctgctcgctttcacgaggacgatgactacgggctgctgctccaggct
gaagctctgttggaggaatgcctgctagagaacgttgctctacttcggagctctacctgt
ctgtccgaacaaactcaacccaaactagctcaagccaaaagccatttgaacaacctactg
agcagaggacgcctggagccacgctacctaaatgaagcattactcctacaggctaaggtg
cactatgcacagggtcactatcgagattcccagggaatggttgctcgtgctggcattgag
gaattcacccaggatgagcagcccctttaccatctgcgcctgctggctgaggcgtttgtc
atcaaaggcctgtctctggaccatcaaacggtgtctgctgcttcgcgtgttcgtctctct
gagcgagaggaagaatgtctgtcttgttatctccgggcttgtgatactgctctgctctac
ctgcaaaagttagacaaggctgtttgctcagcgactaacaaggcagccaaaagcggtgga
tcagcttgtctagcagaggtggacccaggttacttcctgcaggctgcccttcagagcgca
tatctttgcttgctacagaaaggtcatttggttcaggggactaaccaattgcgtcaggtc
ttgagggtggtggacagccacgggtctcagaattttcgtaagacagtagcaaggaagctc
gctgaagtgttgttgagttcagtcagtgagnaaagctactgggggccgttgtcacctcca
ccccctacatggctgcacaaggaaggagccacacacccaaaagatgccatctatccttcc
tccagaccaccacagtactacaacacagagggagcgttctgtccacaggacgtggtggag
gaggctgtgctcctgctgctcatcacagagtcaatggccagcggtgaggcagtgatcagc
cgcaccccagagcacaaggaggcacgtgaggcaagcatccaggatgcctccactgtgtat
gacctgcttagcatcggcatggccagaagggggcaatatgccatgctttctgagtgtttg
gagcgggctatgaagttttcctttaatgagtatcatctctggtaccagctgggtttgtct
ctcatggcttgtggaaagaatgaaggtgctgtgtctgtgcttaaagagtgcaccaagatg
aaacctcaggaccctataccaccactgctggcagccaaagtgtgcattaaccagctgcac
tggctagatgaagccgagactcttgcaaaaggtgtagttgcgttgggtgaaggagctgag
gagtctcttgccagagcacacctgaccgtaggactgtgttatagtctacaagcttcagat
gcgatgctgaaaggtgaacgagataagttcaacagaagagcactacaggcactgcagact
gctcattcactggacccccaggacgctcagattgccctctacctcgctcttcagttagcc
ttagtgcgacaggtgtcagcagcgatggagcctctgcagctagctcttaagctacgtagc
gatgatctgcactccttacatctgctggtgcttctgcttagtgctcagaaacactaccag
cacgccctcgacacacttaccctcaccatcagccagtaccctgacaacgtcaacctgctc
tttactaaagtgaaactggaggaggctttgtttggtccagctgtagctttgcagacatgt
gaggaaatgttacacttgtggcagaattgctatgatattgcccgaccaagtgagactgat
gacagcagcagtattcctcctcctgagccaggcccattaaacagaaagcccagcggccta
catctcgctctaccggatttccaggagacagaaaccggctctcagagtgctccatccctg
gctgtgtctcggctggagcaggtcatgtcagaagtgtctgcagtcagctctacccagagg
catggtcctgcccacatttggacgactttggagcgcatctggctgcaggcaggggagctg
ttcatggctgatggacggctgaaggaggctcagttctgtgtgcaggaagctggagcccta
ttccccacctcacactctgtgttactgctgaaaggccgacttgctgagcgcagagggaac
gataccgaggcaaagactctgtatgacgaagccctggctatcaaccccacgggacatcat
atactaattcacctagggaagttgttggtgcgtatgggccgtgtcggtttaggagagaag
gtgttaagggatgcagtgcagacccatagtcttgcccacgaagcctggagcggcctagga
gaggcgctgcagagccgcggcagcactcaggcccctgactgcttcctcacggccttggag
ctggagtccagctgtcccatcaggcctttcagcatcatcccccgagagctgtga
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