Silurus meridionalis (southern catfish): 124400788
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Entry
124400788 CDS
T08004
Name
(RefSeq) shaker-related potassium channel tsha2-like
KO
K04879
potassium voltage-gated channel Shaker-related subfamily A member 6
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124400788
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124400788
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124400788
Ion channels [BR:
smeo04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
124400788
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Motif
Pfam:
Ion_trans
BTB_2
Ion_trans_2
PKD_channel
VP7
Motif
Other DBs
NCBI-GeneID:
124400788
NCBI-ProteinID:
XP_046728506
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Position
18:11570098..11576229
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AA seq
484 aa
AA seq
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MTVVPGENLDETVALAALCHDAYEPERSDQECCERVVINISGLRFETQLKTLAQFPSTLL
GDPRKRMRFFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPVDIFMEEIKFYELG
EDVIENFKEDEGFIKEEERPLPENEFQRQVWLLFEYPESSGPARGIAIVSVLVILISIVI
FCLETLPEFREDNRSYDEQIPINGTVSENKANPFTDPFFIVETLCIIWFSFELVVRFLAC
PSKAAFFKNIMNTIDVVAIMPYFITLGLELAEHQGNGQQAMSLAILRVIRLVRVFRIFKL
SRHSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAETDDPESGFSSIPDAFWW
AVVSMTTVGYGDMCPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEHEEQL
QYTHVTCGQQQQQQQQQPGYGEFGRSESKPSLSKSDFMDSEDAESIKYTNCSPHKAYTGK
LTDV
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggtgcccggggagaacctggacgagacggtggccttggccgctctctgtcac
gatgcttacgagccggagaggtcggaccaggagtgctgcgagcgagtggtcatcaacata
tcaggcctgcgcttcgagacgcagctcaagactcttgcccagttcccaagcactctgctc
ggagacccgagaaagcggatgcgcttcttcgacccactcaggaatgaatacttcttcgac
cgcaaccggccgagctttgatgccatcctgtattactaccagtcaggcgggagacttcgg
agacccgtcaacgtgcccgtggacatcttcatggaggagatcaagttttacgagctcggc
gaagacgtgatcgagaatttcaaagaggatgagggcttcatcaaagaggaggagcgcccg
ttaccggagaacgagttccagcgtcaagtctggctcttgttcgagtatccggagagctcc
ggtcccgccagagggatcgcgatcgtctccgtgctcgtgatcttgatctccatcgtcatc
ttttgcctggagacgttgcccgagttcagggaggacaacagatcgtacgacgagcaaatt
ccgattaacggtacagtgagcgagaacaaagcgaatccgttcaccgacccgttttttatc
gtggagacgctgtgcatcatctggttctccttcgaactggtcgtgcgttttttggcgtgt
ccgagcaaggcggctttcttcaaaaacatcatgaacactatcgacgtggtggcgatcatg
ccgtacttcatcacgctcggtctcgagctcgctgagcaccagggcaacgggcagcaggcc
atgtcgctggctatcctgcgcgtcatccggctcgtgcgcgttttccgcatcttcaagctc
tcgcgccactccaagggccttcagatcttgggcaagacgctacaggcgagcatgcgcgag
ctcggccttttgatctttttcctcttcattggggtcatcctcttctcaagcgcagtctac
tttgctgagacggacgaccccgagtcgggctttagcagcatcccggacgctttctggtgg
gccgtggtctccatgaccactgtaggttatggagacatgtgccccgtgaccattggaggc
aagatcgtgggctcgctgtgcgccatcgccggtgtgctcaccatcgcgcttcctgttcct
gtgatcgtgtccaactttaactacttctaccaccgggagaccgagcacgaggagcagctt
cagtacacgcacgtcacttgtggtcaacagcagcagcagcagcagcagcagcccggatac
ggagagttcggcaggagcgagagcaaaccttccctctccaaatcggactttatggactcg
gaagacgcggagtcaatcaagtacacaaactgcagtccccataaagcctacacggggaaa
ctcacagatgtatga
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