Silurus meridionalis (southern catfish): 124400832
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Entry
124400832 CDS
T08004
Symbol
zbed4
Name
(RefSeq) zinc finger BED domain-containing protein 4 isoform X1
KO
K24640
zinc finger BED domain-containing protein 4
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124400832 (zbed4)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
124400832 (zbed4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Flu_PB2_4th
Motif
Other DBs
NCBI-GeneID:
124400832
NCBI-ProteinID:
XP_046728574
LinkDB
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Position
18:complement(12017402..12026792)
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AA seq
1243 aa
AA seq
DB search
MDGEEGLSQKTDDVHLEHNGAVENDKRKEVKNTCLKIEGQDGYVFKSYSMTPHENPLAKF
SLVEQTLTNVSSQVDGHLEVDGPEAETCDKQDCSTSPAISDDTSQTTEIDKDNLINDTSV
HIKEEPSETGESSQDDDKLFFDGSVGPFVTRSNEEDYDNLLSGYTSTLYDVAMDAVTQSL
LTSIRNPLNPRKKSPAWNHFFISPRDSTKAICMYCMKEFSRGKNEKDLSTSCLMRHVRRA
HPTVLLQDIDSPNTSFNSASSLIPPVKSPNNDLAASSKSHSNNLTSPSTFTAEAADVASK
EAPQKVKPKVEKSAKTDSGAAPSPHSINNHSDDAMGTGSDGSASTPKSSNSRRRSAVWKH
FYLSPADSSKAVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHRDIVIEENGQGSTIPPPY
TTPPTLLSHSQMQDHVEIKKEPPCTSSSPETMSDEVPMDDSENMDLKEELNDASYSGQES
SLNMPFVLKSEGLELSSSPEDSVEVSSLAPEPSSVFQQNKKIMKRVKSEVWHHFIVSPVD
QLKALCRYCPCVISRGKRGDFGTSCLMRHLMRRHPDVLKNQKSTSDKATLPQSPQSTLAT
EEDMLSNPTDSPASEKKRHTQTIFSKKTSKLWNHFSLSSADPTKVVCLHCNRTISRGKKT
TNLGTSCLFRHMQRFHGHVLENNSNISGDASSAEVKQKLMDTSAYEESSEKFDDCHPVAK
KITRLVAEMLALDLQPSAMVENVGLNRLLEYLQPQYSLPSSSYFTSTAIPEMYESVKEVV
LTHLKEAESGIIHFTTSIWVSSQTREYLTLTAHWVTFESRVRPQGQDFHCSALLGVSPID
CDYNMLSIQKQLEYLWDTWIVSSGLKLGFTVTDNQAIGNVLEDNAHTLMNCFGHNIDLIV
NEAIKSQRMVQSLLSIARKICERVHRSAKAKEKLAELQKAYNLPENQLIQDVPSKWKTSY
FMLERLVEQKKAIDEMSLECNFRELISCDQWEVMQSVCNALKPFEVACREMNNRTATLGQ
VIPLIHILNRKIDMLFDETMGIDNMLKSLKEAMVTRMSPTLHDPRYTWATMLDPRYKTSL
FTEEEAEKCKQELIREVQRVSISAAAESKPALSNGCSEDPAPSNSSTMNKDNLWALMDDI
RQKIKHDDRPKSSELAVLEYLEEDILDQSCDPLDYWNLKLFLWPELAKVAVRYVGCPPSI
VPADTLFSTSSVNCALNQSRPLLENLERLLFLKVNLPLIYFQY
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggatggggaggaaggcctttctcaaaagactgatgatgtgcacttggaacataacggt
gcggtggaaaatgacaagagaaaagaggtgaaaaacacctgtttaaaaattgaggggcaa
gatggttatgtttttaaatcatacagcatgacccctcatgagaatccactggcaaagttt
tcacttgtagagcagacactcactaatgtatcttctcaggtcgatggacatttagaggtg
gatggtccagaagcagaaacctgcgataagcaggactgttcaacttctccagccatttca
gacgatacatctcagactactgaaatagacaaagacaatttaataaacgacacaagtgta
catattaaagaggaaccgagtgaaacgggcgaaagctctcaggatgacgataagttattc
ttcgatggttctgtaggtcccttcgtcactaggagtaatgaggaagattatgataatcta
ctgagtggctacacgagtactctttacgatgttgcaatggatgcggtcacacaaagcctt
ctgacatctattagaaaccctcttaatccgagaaaaaaatctcctgcctggaatcatttt
ttcatatctcctcgcgatagtaccaaagctatctgtatgtattgtatgaaagagtttagt
cggggtaaaaatgagaaagacctcagcactagttgtttaatgaggcatgtgcgaagggct
caccctactgtacttttacaagacattgactcaccaaatacttcatttaattctgcctca
tctctaatacctcctgtcaaatcaccaaataacgatctggcagctagcagtaaatcccac
tcaaacaatctcacctcaccatccacctttacagcagaagccgcagatgtagcatccaaa
gaggcaccccaaaaagtcaagccaaaagtggaaaagagtgccaagactgattctggtgca
gccccatctcctcattccataaacaaccacagtgatgacgccatgggcactgggtctgac
ggctcagcatccacccctaagagctcaaattctcgaaggcgatcagcagtgtggaaacac
ttttatctgtctcctgctgatagctccaaagccgtttgcattcactgtatgaatgagttc
agtcggggtaaaaatggaaaagacctggggacaagttgtctaattcgccacatgtggcgg
gcccaccgagacatcgtcattgaagaaaatggacaaggctcaacgattcctccaccgtat
actaccccgccaacactattatcacattcacagatgcaggaccatgtagaaataaagaaa
gaacccccttgcacttcctcatcccccgaaaccatgtcagacgaagtgcccatggatgat
agtgagaatatggatttaaaggaggagttgaatgatgcctcatattctggacaagagtct
tcactgaacatgccatttgttctaaaaagtgaaggtctagagttgtcctcttccccagaa
gattctgttgaagtctcgagtctagctccagagccaagctcagttttccaacaaaacaaa
aagataatgaaaagagtgaaatcggaagtatggcaccacttcatcgtctccccggttgac
cagctcaaggctttgtgtcggtactgtccatgcgtcattagtcgtggcaagcgtggagac
ttcggcacgagctgtttgatgcggcatctgatgaggcgacatcctgatgtcctaaagaac
caaaaaagcacaagtgacaaagcgaccttacctcagtccccccagagcaccctcgctaca
gaggaggacatgctgtcaaatccgaccgacagccctgctagcgagaagaaacggcacacg
caaaccatttttagcaaaaagacttcaaagctgtggaatcacttttctctttcttctgct
gacccaaccaaggtggtctgtttgcactgtaatcgtacaataagcaggggtaaaaagaca
acaaacctgggcactagttgcttgtttaggcacatgcagaggtttcatgggcatgtgctc
gaaaataatagtaatatctcaggtgatgcatcgtctgcggaagtaaaacagaagctcatg
gacacgtctgcgtatgaggagagtagtgaaaaatttgatgattgtcacccagttgccaaa
aaaatcaccagactcgtagccgaaatgcttgcactggatcttcagccatcagctatggtg
gaaaatgttggtttgaaccgattactggaatacctccaaccacagtattctcttccctct
tcatcatacttcaccagcaccgccataccagaaatgtatgaaagtgtaaaagaggtcgtt
ctgacacacctcaaagaggccgagagtggaattattcattttacaacaagcatatgggta
agcagccaaacgcgggaatacctgactcttacagcccactgggtgacgttcgagtcacgt
gtccgacctcaggggcaagatttccactgctcagctctgcttggcgtctctccaattgac
tgtgattataacatgcttagcattcagaagcaacttgagtacctttgggacacctggatt
gtttcctcaggcctgaagcttggattcactgtcactgataatcaagccattggaaatgtc
ctggaggacaatgctcacaccctcatgaactgttttggtcataacatagatctcattgtt
aacgaagccataaagagccagaggatggtacagagcttgttgagcatcgcccggaagata
tgtgaacgagtacatcgctcagccaaggcgaaggagaaactggcagaacttcagaaagcc
tataacttgcctgaaaatcagctgatccaggatgttccctccaagtggaagacctcctat
tttatgcttgaaagattagttgagcaaaagaaagccatcgatgaaatgtctttagagtgc
aatttcagggaacttataagctgtgaccagtgggaggtgatgcaatcagtttgcaacgct
ctgaaaccttttgaagtggcctgcagggaaatgaacaatcgaacggccacacttggccag
gtcataccgctcatacatatcctcaaccgcaaaatagacatgcttttcgacgagactatg
ggtattgacaacatgcttaaatctctaaaagaggccatggtgaccagaatgtctcccaca
cttcatgatccacgttatacatgggcaacgatgcttgaccctaggtacaagacctccttg
ttcacagaggaggaagccgagaagtgtaagcaggagctcatacgagaagtacagagggta
tccatatcagcagctgcagaatcgaaacctgcgttgtcgaacgggtgcagcgaggaccca
gctccatcgaacagttcaaccatgaacaaagacaacctatgggccctaatggatgacata
aggcaaaagattaagcacgatgaccgaccaaagtcatccgagcttgctgttttggagtat
ttggaagaagatatacttgaccagagctgtgatcctttggactattggaatctcaagttg
ttcttgtggcccgagcttgccaaagtagccgtacgctatgtgggttgcccacccagcatt
gtaccagcagatacactgttcagcacatcaagtgtcaactgtgccctgaaccagtctcga
ccattgctagaaaatcttgaaagactcttatttttaaaggtcaatcttcctttgatatat
tttcagtactaa
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