Silurus meridionalis (southern catfish): 124401029
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Entry
124401029 CDS
T08004
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124401029
Membrane trafficking [BR:
smeo04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
124401029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
Motif
Other DBs
NCBI-GeneID:
124401029
NCBI-ProteinID:
XP_046728884
LinkDB
All DBs
Position
18:23017453..23069819
Genome browser
AA seq
1628 aa
AA seq
DB search
MRRLEMASKDIAAPCFPSVSRELTDSIRKFIDKSAVKFARGVKLETKNGKSEDRILVITT
WRLYLMASKVPTKVETTFNFLEIRAMNTHPEMQVVIETEKSTYSLRLQSREHRDHVINHI
NYALSRIFNNSVFAPSLCHSDSDLSDGSRKYSPSSDTSVETQRACGGFSETYAALCDYNG
ISCKEEVQWDVDTIYHSQDNREFNLLDFSHLESRDLAVIVASMAYNTWFTKLYCKDMRIG
SEVTEQVLHTLSKSSSLEELTMENVGLKSDFPQKMSVALSENPASVIHSLNLAHNTLDNQ
GVCNLIQQVCRLSKGLRLLNLSKTSLSSKGVVSLSQALCSNDDYSNSLLHLDLSKNPGVL
SGEDAMHLHMFLSQPNCLVHLDLSGTDCCVDSLFGALLRGCCADLSYLNLSKNSFAHRKT
KETLPLFRQFFSSAFSLTHVSLASMKLPPEALRNLFLGLTNNPHINDMHLDISSCELRSA
GAAVLQELFPRVTSIATLDVSDNGFDGDLLTVLSGLSRHPSLRHLHLGKNFNIKSRYGRV
LDEILHKLVQLIQEEECVLQSLSLVDSRLRSRGTVLVNALGSNACLRKVDLSGNGLEDIG
AKMLSKALQINTTLRSVTWDRNNTTAAGLMDVAQALEHNFTLQYMPIPLSDVTQAYRSAP
EKTEQALTKIQRALLRNNQTQRFSQRQALRLHQGLVTSTAEQVMERLCVRVQQQVCVLRG
VSDAEELQAAKQVLKEARNSRALYPSLCELAHVLSVDGPVRQRLDSLAGELAKAADKELQ
VIVDSMVSLCRELCPLSSGAAERLSPPLSSVSERVSIPRSAIRTALMERAAQDIHRVLEE
VKLSVVSYLTNSIVDQILQELYSTHKALTLQVSQMKQWDGLCDGGTGRRSHRHRDSLEIT
DEELGTSIDTIAIKKRSARTRRIRPVSTRLSLCDDSSSSPPNSGAQLSSPLSRSASWEGL
SALPTQGAPLHHVTRVRPRPPRRHRGGILSSDSHCTENGSVTPLDDGLPDFYSKRVLPDS
QLSSLHKAHSLRRKKRRNMLAIFGFRRNRNSTLSNQDSDSVGVACSEDCRTVATAPTGNA
LENVYTLLQPPRIPGRGGCPVESDGNVEEQKMDEPRVGLMEIRSIHGMPLSTFRTNKHPF
YTGKMISEMEPDHDPCSGLKDREIDRQTLKPGDRQPSWETDRQKQLDRELEWQNLRKSES
ETDGQTLRHVNRVLERQASRQMDKTSEREADRQTIRKSEKELDRATPRQIDKPGEREIDR
HTLRQTDRELDRQTLWKAERELDRQALRQIDRELDRQSLWRADRHSERELDRHTLRQLDR
QAEAQQKQWLETRKGTDRKWAESKQQTDTQWTDLRQVDRQSERQWMDRQIDRHTHRIPSP
IAERDFCPDDKQIHCEDTHSDSGSWEQSMDRSPPSDPQMEHQIEPCSSDERCKGVGTRGT
SVGRLVLCPSKPEPPPQSSKPSLAKLRQRPLQESSGTEDELGETNSFRIDRKDQDNIERV
RETEAHHPPIPAKPKTASYILSPTESTSDRRILPATPPASTKPTLGLTERSHTQGEECVR
PQAPVKPQRSRKALSCDTGTDRDSPNNLEKPPIPRNPPVKKPRAPQNRNLSLDQPDSFGA
LPGNSEPL
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgagaagactggaaatggcttctaaagacatcgctgctccgtgttttcccagcgtatcc
agagaacttacagacagcatcaggaaattcatcgacaagtctgcggtcaagttcgctcgt
ggcgtcaagcttgaaaccaaaaatggaaaatcggaagacaggattctggtcatcaccaca
tggaggctgtacctgatggcgtccaaagtaccgacaaaggtggagaccacgttcaatttc
ctggaaatccgagccatgaacactcacccggagatgcaagttgtcatagaaaccgagaag
tccacctactccctaaggctgcagtcacgtgagcaccgcgaccatgtgatcaaccacatc
aattacgccttatcgcggatattcaacaactcggtgtttgctccgtccctctgtcactcc
gacagtgatttgtcagatgggagtaggaagtactctccaagctctgacacatcagtggag
acacagagagcgtgtggtggcttctcagagacgtatgctgctttgtgtgattataatggt
atcagctgtaaagaagaggtgcagtgggatgtggataccatctatcattctcaagacaac
cgtgagtttaatctactggacttcagtcacttggagagtagagatcttgcagtaattgtt
gcctccatggcctacaacacgtggttcaccaaactctactgcaaagacatgcgcatcggg
tcagaggtcacagagcaggtcctacacacgctcagtaaatcgtccagtctggaagagctg
acaatggagaacgtgggactcaaatctgacttccctcagaaaatgtctgttgcactgtcg
gagaatccagcatccgtgattcattccctcaatttggcacacaacaccttagacaatcaa
ggcgtgtgcaatctgatccagcaggtgtgtcgcctaagcaaaggactccgcctcctcaac
ctgtccaaaacctcgctctcgtccaaaggtgtggtctctctctctcaggcgctttgctcc
aacgacgattactcaaactcgctcctgcatttagacctgagcaagaaccccggtgttctg
tccggagaggacgcaatgcatctgcacatgttcctctctcagcccaactgtttggtacac
ttggacctatcagggaccgactgctgtgtggactcgctgtttggggctctgctccggggc
tgctgtgccgacctttcttacctcaacctctccaaaaactcctttgctcacaggaagacg
aaggagactctgccgctgtttcgtcagttcttcagctccgcgttcagcctcacgcacgtc
agtttggcgtcgatgaagctgccgccggaggccctcagaaatttgttcttaggcctgacc
aacaaccctcatataaacgacatgcatctggacatcagcagctgcgagctgcggtcagcg
ggagcggctgtcctgcaggagctttttccacgcgtcacgtccatcgctacgctggacgtc
tcagacaacgggtttgatggggaccttctgaccgttttaagcgggctgtccagacatccc
tcactcagacacctccacctgggcaagaactttaacatcaagagcaggtatggcagggtg
ttggatgaaattctgcacaaactggtccagctgatacaagaggaagagtgtgtcctgcag
tctctgtccctggtggactcgcgcttgcgttcgcgtggcacagtgttggtgaacgctctg
ggaagcaacgcctgcctcaggaaagtggacctgagtggaaacgggttggaggacatcggc
gccaaaatgctcagcaaagccctgcagatcaacaccacgctacggagtgtgacctgggac
cggaacaacaccaccgcagcagggttaatggacgtagcacaagctttagaacataatttc
actttgcagtacatgcccatccccctcagtgatgtcactcaagcatatcgaagtgcccca
gagaagacggagcaggcgctcactaagattcagagagctttactaagaaacaaccaaaca
cagcgattctcccagaggcaagcgctacgcttacaccagggcttagtgaccagcactgct
gagcaggtcatggagcggttgtgtgtacgagtgcagcagcaggtgtgtgttctccgcggg
gtttcagatgcagaggagcttcaagcagccaaacaggtcctgaaagaggctcgcaactct
cgtgcgctctacccatcactgtgtgagttggctcatgttctctctgttgatggaccagtc
agacagagactagactcactggctggagaactggccaaggctgcagacaaagaactgcag
gtgattgtggactcgatggtgtctctgtgccgagagctgtgtcctctgtcgtccggggcg
gccgagcgcctgagccctccgctatcctctgtctcagaacgagtgtcgatccctcgttcg
gcgatccgcaccgcgttgatggagagagcggcgcaagacattcaccgggtgctcgaggag
gtgaagctctccgtggtgtcgtatctcaccaactcgatcgtggatcagatcttacaggag
ctctactctacccacaaagctctgaccctgcaggtgtctcagatgaaacagtgggatggc
ctgtgtgatggtggcacaggtcgaaggtcacacagacacagagactccctggagatcact
gatgaggagctgggcacgagtattgacacgatcgccattaagaagcgcagtgcgaggacc
agacgaatccgaccggtatccactagactgagtttgtgtgatgactccagctcgtctcct
cccaactcgggcgctcaactctcctcacccctctctcgctcggcatcatgggagggtttg
tctgccctgccgacccagggtgcacctctacatcatgtgacgcgggtgaggccgaggcca
ccgcgacgccaccgagggggcatcctttcatccgactcgcactgtactgaaaatggatct
gtcactccgttggatgatggactgcctgatttttacagcaaacgagttctacccgatagt
cagttatcctcgcttcacaaagcccactcactccggcgaaagaagagacgcaacatgctg
gccatctttggttttcgtaggaaccgtaattccacgttgtccaatcaggattctgattca
gtgggcgtggcctgtagcgaggattgccggaccgttgcgacggctcccactgggaatgcc
cttgagaacgtctacactcttctccagccccctaggatacccggtagaggtggctgcccg
gttgaatccgatggaaatgtagaagagcagaaaatggacgaacccagagtaggattgatg
gaaatacgctccatccatggaatgccactgtccacattcaggaccaacaagcaccccttt
tacactggcaaaatgatatctgagatggagcctgaccatgacccatgctcaggactaaag
gacagagagatcgacaggcagacattaaaaccaggtgacaggcagccgagctgggagaca
gacaggcagaagcaactcgaccgagagcttgagtggcaaaatctcagaaaatctgaaagt
gagacggacggacaaactctgcgccacgtaaacagagtgttggaaaggcaggcatcaagg
cagatggacaaaacctcagagagagaagcagacagacagaccataaggaagagtgagaag
gagcttgaccgagcaacgccgaggcagatcgataagcctggtgagagagagatagacaga
cacactttgagacaaaccgacagggagctagaccggcagacgttgtggaaggcagagaga
gagctagacagacaggctttaagacagatagaccgagagttagacaggcagagtctatgg
agggcagacaggcattcagagagggagttggacagacacactctgaggcagctcgacagg
caggctgaggctcaacagaagcagtggttagagacccgaaaagggacagataggaagtgg
gcagagtcaaagcagcagacggacacacagtggaccgacttaaggcaggtggacaggcag
tctgagaggcagtggatggaccggcagatagacagacacacacacaggatcccatcgccc
attgccgagagagatttctgccccgacgataagcaaattcactgtgaagacacacattct
gattcaggctcctgggagcagtcgatggatagaagcccaccctcagatccacaaatggaa
caccagatcgagccatgttcatcagacgagagatgcaagggggtaggcacaagagggaca
tcagtggggcgcctggtactgtgcccatccaaaccggagcctcctccgcagagcagcaag
cccagtttagccaaactcagacagagacctctgcaggagagctcaggtaccgaggatgaa
cttggagagaccaatagttttcgaatagacaggaaggaccaagataacatagagcgagta
agagaaacagaggcacatcatcctccaatcccagctaagccaaagacagcttcatatatc
ctctcaccaactgaatcaaccagtgataggagaatcctaccagctacacccccagcctct
acaaaacctaccttagggctgactgaacgctcccatactcaaggcgaggagtgtgtgaga
ccgcaggctccagtcaaaccacagaggagcagaaaagctttgtcttgtgacacaggcaca
gacagggacagccctaataacctggagaagcccccaatccctcgcaacccccctgtgaaa
aaacctagagccccccagaacagaaacctatccctggaccagcctgatagttttggagcg
ttgcctggcaacagcgagcccttgtga
DBGET
integrated database retrieval system
