Silurus meridionalis (southern catfish): 124401110
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Entry
124401110 CDS
T08004
Name
(RefSeq) deoxycytidylate deaminase-like
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00240
Pyrimidine metabolism
smeo01100
Metabolic pathways
smeo01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
124401110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
smeo02044
]
124401110
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
124401110
Secretion system [BR:
smeo02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
124401110
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
APOBEC3
APOBEC_N
APOBEC4_like
zf-RING_15
Cyclophil_like
APOBEC2
KR
Motif
Other DBs
NCBI-GeneID:
124401110
NCBI-ProteinID:
XP_046729050
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All DBs
Position
2:2343713..2389656
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AA seq
186 aa
AA seq
DB search
MASKNRESGKDTEPGPPPPMATTGSYKDEVYFMTVALLFAKKSPDPNTKVGACIVNQEGK
IVGIGYNKMPNGCENADFPWKRGKYDDPTTKHQYVCHAELNAIVNKTSVDVKGCTIYVTL
FPCNQCARILIQSGVRNLVYLSNKRKDRPDTNVSNKLLDTAGVTCRQFTAQGDVCALLKS
IDPNAE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaaaaacagggaaagtggcaaagacactgagccaggaccaccaccaccaatg
gcgacaactggatcatataaggatgaagtatattttatgactgttgctctcctgtttgct
aaaaagagccctgatccaaacacaaaggtgggtgcatgcattgtaaatcaggaagggaag
attgtaggaattggctacaacaaaatgcccaatggctgtgagaatgccgatttcccctgg
aaacgtggaaagtatgatgaccccacgaccaaacatcaatacgtgtgccatgcagagctg
aatgccatcgtgaataaaacctcagtggatgtgaagggatgcaccatttatgtcacactg
tttccctgtaatcagtgcgccaggatcctcatccaatcaggtgtaagaaatttggtttat
ttgtcaaataaacgtaaagacagacctgacacaaatgtttctaataaactgctggacacc
gcaggtgttacatgcaggcaattcactgcacagggtgatgtctgcgccctgctgaagtcc
atcgatcccaatgctgagtga
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