Silurus meridionalis (southern catfish): 124401119
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Entry
124401119 CDS
T08004
Symbol
pparaa
Name
(RefSeq) peroxisome proliferator-activated receptor alpha a
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03320
PPAR signaling pathway
smeo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124401119 (pparaa)
03320 PPAR signaling pathway
124401119 (pparaa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124401119 (pparaa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smeo03310
]
124401119 (pparaa)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124401119 (pparaa)
Nuclear receptors [BR:
smeo03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
124401119 (pparaa)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
124401119
NCBI-ProteinID:
XP_046729056
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Position
18:9394379..9407423
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AA seq
530 aa
AA seq
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MCSTAKDIRVVCGVWTLAPAGARAYLLAAAARTHSCGVICLMSDPVLAVPWLSTMVDIPN
PFSPLPSAGEIGLDSPLCGELIKEMEELEDISRSFSDDAFNLLYLPDFQESSTNSNSSAT
LDVLSPASSPSSAACGTVTGQDEINPSPLNLECRVCSDRASGFHYGVHACEGVSVIDYFK
GFFRRTIRLKLEYDKCERNCKIQKKNRNKCQYCRFHKCLAVGMSHNAIRFGRMPQSEKLK
LRAELQIPEKEEKKMQLDDWKTLASQIHEAYLKQFYLNKAKARAFLTGKTNTPPFVIHDL
DTLQQAQPVLVTQMLSEGRENFALSIQGQETEDRLFHCCQYVSVETVTQLTEFAKAVPGF
SNLDLNDQVTLLKYGVHEAFFALLASCMNKDGMLVARGSGFITREFLKSLRKPFSDMIES
KFQFAMRFNALELDDSDLALFVAAIICCGDRPGLGNISHVDTIQESIVHALRLHLQTNHP
DDTLLFPKLLQKLADLRQLVTEHAQLVQDIKETRDTSLHPLLQEIYKDMY
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtgctccacagcaaaagacattagagtagtgtgtggggtttggactttggcccccgct
ggggccagagcatatttattggctgctgctgctcgtacacactcgtgtggcgtgatctgt
ctaatgagtgatccagtgcttgcagtgccgtggctcagcaccatggtagacatccccaat
ccatttagcccattgccttcagcaggagaaatagggttggacagccctttgtgtggggag
ttaatcaaggaaatggaggagcttgaggacatctcccgatctttcagtgatgacgccttc
aacttgctatacctgcctgactttcaggaatccagcactaattccaacagctctgctact
ctcgatgttttgagtccagcttctagtccatcctcagcagcttgtggaacagtcacaggg
caggatgagatcaaccccagccccttaaatcttgagtgtcgagtatgttctgatcgtgct
tcaggcttccactatggagtgcatgcctgtgagggtgtaagtgtaatagattattttaaa
ggcttctttaggagaaccatacgcctgaagttagagtatgacaagtgtgagcgcaactgt
aagatccagaaaaaaaacaggaacaagtgccagtattgccgtttccacaagtgcctcgct
gtcggcatgtcccacaatgcaattcgtttcggaaggatgccacagtccgaaaagctgaag
cttagagcagagttgcagatccctgagaaagaggagaaaaaaatgcagctggatgactgg
aagactcttgccagccaaatccatgaggcctatcttaaacaattctacctgaacaaggct
aaagcacgagcctttctaactggcaagaccaacacgccgccttttgtcattcatgacctg
gacacactacagcaggcacaacctgttctggtcacacagatgctgagtgagggaagggaa
aactttgcacttagtattcagggacaggaaactgaggatcgcctcttccattgttgtcag
tacgtctcggttgaaaccgtcacacagcttaccgagtttgccaaggctgtgcctggcttc
tccaacctcgacctcaatgaccaggtgacgctgttgaagtacggtgtgcatgaagctttt
tttgccctgctggcctcatgcatgaacaaggatgggatgctggtggcacgtggcagcgga
tttattacccgtgaattccttaagagtctccgcaagcctttcagcgatatgatagagtcc
aagttccagtttgcaatgcgattcaatgctttggagctagacgacagtgacctggcactt
tttgtggctgccattatctgctgtggagaccggccaggactgggaaacatttcgcatgtc
gataccattcaagaaagtatcgttcatgctctgcggctccacctgcagaccaaccaccct
gatgacaccttgctctttcccaaactcctgcagaaactagctgatcttcggcagctcgta
acagagcacgcacagttggtgcaagacattaaagaaacacgggacacctctcttcatcca
ctactgcaggagatttataaggatatgtactga
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