Silurus meridionalis (southern catfish): 124401123
Help
Entry
124401123 CDS
T08004
Symbol
tnpo3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03013
Nucleocytoplasmic transport
smeo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124401123 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124401123 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124401123 (tnpo3)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
124401123 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
124401123
NCBI-ProteinID:
XP_046729069
LinkDB
All DBs
Position
18:complement(16420382..16462005)
Genome browser
AA seq
924 aa
AA seq
DB search
MMDGGKPSLALVYQAVQALYHDPNPAGKERASVWLGELQRSMYAWEISDQLLQMKQDVES
CYFAAQTMKMKIQTSFYELPQETHLALRDSLLSHIQNLKDLSPIIITQLSLAIADLALQM
PSWKGCVHTLIEKYSNDVTSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSTT
VVTLLMTSLEKSGSDEKMLIKVFRCLGSWFNLGVLDSNFMATNQLLVVLFQVLQRDESLT
NLHEAASDCVCSALYAIENVDTHMPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIF
TELCETFMEITVRTPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDP
ALHGVFKPYIQRLLHSLARHCQLDPDHEGIPEDTDDFGEFRLRVSDLVKDVIFLVGSMEC
FSQLYSTLKEGNPPWEVTEAVLFLMASIAKSVDPENNPTLTEVLEQIVLLPQTVHIAVRY
TSIELVGEMSEVMDRNPRLLDPVLEYLMKGLREKQLASVAAKAIHNMCSVCREHMAQHFQ
GLLHIARSLDSFALNTDAAIGLLKGTALVLARLPLEKIAECLSDLCSVQVMALKKLLSQE
SSNRKSLDPTVWLDRLAVIFRHTNPFVENGQIHPCQRVIQEIWPVLSETLNTHQADNRIV
ERCCRCLRFAVRCVGKGSAALLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQ
GLLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFIQRSPVTLLSSSIIVHIIQC
AIAATTLDHRDANCSVMKFVRDLIHTGVSNDHEDDFEVRKRLIAQAMQQHGQQLVTQLIH
TCCFCLPSYTLPDVAEVLWEIMVFDRPIFCRWLEVALKSLPKEMSGGAVTVTHKQLTDFH
KQITSAEECKQVCWAVREFTRLYR
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgatggatggtgggaaaccctcgttggctcttgtttatcaggcggtacaggcgctttat
cacgacccgaatcccgccgggaaggagcgagcttcggtgtggctcggagaactgcagaga
tcgatgtatgcctgggagatctcagaccagctattacaaatgaagcaggatgttgagtca
tgttactttgctgcacaaaccatgaaaatgaaaattcagacatcattctatgagcttcct
caagagacacaccttgcccttcgtgactctttgctctcccacattcagaaccttaaagac
ctctcacctatcatcattacacagctgtccctggcaattgctgatcttgcactgcagatg
ccatcatggaaaggctgtgttcacacactcatagaaaagtacagtaatgatgtgacttca
atgccttttctgattgaaatcctcacagtgctgccagaggaagtgcacagccgatcattg
aggataggtgctaaccggcgaacagagatcatagaggaccttgcatactattctaccact
gtcgttacactgttgatgacatccctggagaagtctgggagtgatgagaagatgcttatt
aaagttttccgctgcttaggcagttggtttaatctgggtgtgctggacagcaacttcatg
gcgactaatcagttgttggtggttctattccaagtgctacaaagggatgagtcccttact
aacttgcatgaagccgcatcagactgtgtgtgctcagccctctatgccattgagaatgta
gatacacatatgcctcttgccatgcagctgttccagggtgttttaacattagaaacggct
taccacatggctgtggcccgtgaggaccttgacaaggtgctgaattactgccggattttt
actgagttgtgcgagacttttatggaaattactgtcaggaccccaggacaaggcatgggg
gacttgcgcacattggagctgttgctcatttgtgctggacatcctcagtatgaggtggta
gaaatctctttcaacttctggtatcgcctgggggaacatctatacaagacaaatgatcca
gcactgcatggtgttttcaaaccctatatccaaagactactacacagcctggcacgtcat
tgtcagctagatccagaccatgaaggaattccggaagacacagatgactttggagagttc
agactgagggtttcggatcttgtcaaggatgttattttccttgtaggctcaatggagtgt
ttctcacagttgtactctaccctcaaagagggaaatccaccctgggaagttactgaagct
gtgcttttcttaatggcttctattgctaagagtgtagaccctgagaacaaccctaccttg
acagaagtgctggaacaaattgtgcttcttcctcagacagtgcacattgctgtgcgctac
accagcattgaattggtgggagaaatgagtgaggtgatggaccgcaaccctcgcttatta
gatcctgtgctagaatatttaatgaaggggctgcgggagaagcagttggcttcggtagca
gcaaaagccattcacaacatgtgctcagtgtgccgggaacacatggcacaacacttccaa
ggcctgcttcacattgcacgatcactggactccttcgctctcaacacagatgccgccatt
ggcctactcaagggaacagcacttgtgctggcaaggcttccactggagaagatagcagag
tgtctgagtgatttgtgctctgttcaggtcatggctctaaagaagctgctgtctcaggag
tccagtaatagaaaatctttagaccctacagtatggctggacagactggcagtaatcttc
agacacacaaatccttttgtagagaatggacaaatccacccttgtcaaagagtcatccag
gagatctggccagtgttatcagaaacattgaacacacaccaggcagataaccgcattgtg
gagcgctgttgccgctgcttgaggtttgctgtgcgctgtgtgggaaagggatcggccgcg
ctactacagccactcgtcacacagatggtgagtgtgtaccaggtgtacccacactcatgc
ttcctgtacttgggcagtattctggtggatgaatatggcatggaggagggctgtagacaa
ggcctgctggacatgctacaggcgctctgcatgcccacctttcagctgctggagcagccc
aatggcctgcgcaaccaccctgacactgttgatgatctgttcagacttgctactaggttt
attcagcgcagccctgtcacattgctaagcagcagtatcattgtccacatcatccagtgt
gccattgcagccacgacgcttgaccaccgagacgctaactgcagtgttatgaagtttgtc
agagacctcattcacactggggtttccaatgatcatgaggatgactttgaggtgcggaaa
cgtctgattgctcaggcaatgcagcagcatgggcagcaactagtaacacagctaatacac
acctgctgtttctgcctgccttcatacacactgccagatgtggctgaagtgctttgggag
atcatggtatttgatcgaccgatattttgccgctggcttgaagtggctctaaaaagcctt
cccaaggagatgtcaggaggagctgtaacagtcactcacaaacagctaacagacttccat
aagcagatcacaagtgcagaggaatgtaagcaggtatgttgggcagtgagagaattcacc
aggctttatcgatag
DBGET
integrated database retrieval system