KEGG   Silurus meridionalis (southern catfish): 124401123
Entry
124401123         CDS       T08004                                 
Symbol
tnpo3
Name
(RefSeq) transportin-3
  KO
K15436  transportin-3
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03013  Nucleocytoplasmic transport
smeo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124401123 (tnpo3)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    124401123 (tnpo3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smeo03016]
    124401123 (tnpo3)
Transfer RNA biogenesis [BR:smeo03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    124401123 (tnpo3)
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 Importin_rep_3
Other DBs
NCBI-GeneID: 124401123
NCBI-ProteinID: XP_046729069
LinkDB
Position
18:complement(16420382..16462005)
AA seq 924 aa
MMDGGKPSLALVYQAVQALYHDPNPAGKERASVWLGELQRSMYAWEISDQLLQMKQDVES
CYFAAQTMKMKIQTSFYELPQETHLALRDSLLSHIQNLKDLSPIIITQLSLAIADLALQM
PSWKGCVHTLIEKYSNDVTSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSTT
VVTLLMTSLEKSGSDEKMLIKVFRCLGSWFNLGVLDSNFMATNQLLVVLFQVLQRDESLT
NLHEAASDCVCSALYAIENVDTHMPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIF
TELCETFMEITVRTPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDP
ALHGVFKPYIQRLLHSLARHCQLDPDHEGIPEDTDDFGEFRLRVSDLVKDVIFLVGSMEC
FSQLYSTLKEGNPPWEVTEAVLFLMASIAKSVDPENNPTLTEVLEQIVLLPQTVHIAVRY
TSIELVGEMSEVMDRNPRLLDPVLEYLMKGLREKQLASVAAKAIHNMCSVCREHMAQHFQ
GLLHIARSLDSFALNTDAAIGLLKGTALVLARLPLEKIAECLSDLCSVQVMALKKLLSQE
SSNRKSLDPTVWLDRLAVIFRHTNPFVENGQIHPCQRVIQEIWPVLSETLNTHQADNRIV
ERCCRCLRFAVRCVGKGSAALLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQ
GLLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFIQRSPVTLLSSSIIVHIIQC
AIAATTLDHRDANCSVMKFVRDLIHTGVSNDHEDDFEVRKRLIAQAMQQHGQQLVTQLIH
TCCFCLPSYTLPDVAEVLWEIMVFDRPIFCRWLEVALKSLPKEMSGGAVTVTHKQLTDFH
KQITSAEECKQVCWAVREFTRLYR
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgatggatggtgggaaaccctcgttggctcttgtttatcaggcggtacaggcgctttat
cacgacccgaatcccgccgggaaggagcgagcttcggtgtggctcggagaactgcagaga
tcgatgtatgcctgggagatctcagaccagctattacaaatgaagcaggatgttgagtca
tgttactttgctgcacaaaccatgaaaatgaaaattcagacatcattctatgagcttcct
caagagacacaccttgcccttcgtgactctttgctctcccacattcagaaccttaaagac
ctctcacctatcatcattacacagctgtccctggcaattgctgatcttgcactgcagatg
ccatcatggaaaggctgtgttcacacactcatagaaaagtacagtaatgatgtgacttca
atgccttttctgattgaaatcctcacagtgctgccagaggaagtgcacagccgatcattg
aggataggtgctaaccggcgaacagagatcatagaggaccttgcatactattctaccact
gtcgttacactgttgatgacatccctggagaagtctgggagtgatgagaagatgcttatt
aaagttttccgctgcttaggcagttggtttaatctgggtgtgctggacagcaacttcatg
gcgactaatcagttgttggtggttctattccaagtgctacaaagggatgagtcccttact
aacttgcatgaagccgcatcagactgtgtgtgctcagccctctatgccattgagaatgta
gatacacatatgcctcttgccatgcagctgttccagggtgttttaacattagaaacggct
taccacatggctgtggcccgtgaggaccttgacaaggtgctgaattactgccggattttt
actgagttgtgcgagacttttatggaaattactgtcaggaccccaggacaaggcatgggg
gacttgcgcacattggagctgttgctcatttgtgctggacatcctcagtatgaggtggta
gaaatctctttcaacttctggtatcgcctgggggaacatctatacaagacaaatgatcca
gcactgcatggtgttttcaaaccctatatccaaagactactacacagcctggcacgtcat
tgtcagctagatccagaccatgaaggaattccggaagacacagatgactttggagagttc
agactgagggtttcggatcttgtcaaggatgttattttccttgtaggctcaatggagtgt
ttctcacagttgtactctaccctcaaagagggaaatccaccctgggaagttactgaagct
gtgcttttcttaatggcttctattgctaagagtgtagaccctgagaacaaccctaccttg
acagaagtgctggaacaaattgtgcttcttcctcagacagtgcacattgctgtgcgctac
accagcattgaattggtgggagaaatgagtgaggtgatggaccgcaaccctcgcttatta
gatcctgtgctagaatatttaatgaaggggctgcgggagaagcagttggcttcggtagca
gcaaaagccattcacaacatgtgctcagtgtgccgggaacacatggcacaacacttccaa
ggcctgcttcacattgcacgatcactggactccttcgctctcaacacagatgccgccatt
ggcctactcaagggaacagcacttgtgctggcaaggcttccactggagaagatagcagag
tgtctgagtgatttgtgctctgttcaggtcatggctctaaagaagctgctgtctcaggag
tccagtaatagaaaatctttagaccctacagtatggctggacagactggcagtaatcttc
agacacacaaatccttttgtagagaatggacaaatccacccttgtcaaagagtcatccag
gagatctggccagtgttatcagaaacattgaacacacaccaggcagataaccgcattgtg
gagcgctgttgccgctgcttgaggtttgctgtgcgctgtgtgggaaagggatcggccgcg
ctactacagccactcgtcacacagatggtgagtgtgtaccaggtgtacccacactcatgc
ttcctgtacttgggcagtattctggtggatgaatatggcatggaggagggctgtagacaa
ggcctgctggacatgctacaggcgctctgcatgcccacctttcagctgctggagcagccc
aatggcctgcgcaaccaccctgacactgttgatgatctgttcagacttgctactaggttt
attcagcgcagccctgtcacattgctaagcagcagtatcattgtccacatcatccagtgt
gccattgcagccacgacgcttgaccaccgagacgctaactgcagtgttatgaagtttgtc
agagacctcattcacactggggtttccaatgatcatgaggatgactttgaggtgcggaaa
cgtctgattgctcaggcaatgcagcagcatgggcagcaactagtaacacagctaatacac
acctgctgtttctgcctgccttcatacacactgccagatgtggctgaagtgctttgggag
atcatggtatttgatcgaccgatattttgccgctggcttgaagtggctctaaaaagcctt
cccaaggagatgtcaggaggagctgtaacagtcactcacaaacagctaacagacttccat
aagcagatcacaagtgcagaggaatgtaagcaggtatgttgggcagtgagagaattcacc
aggctttatcgatag

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