Silurus meridionalis (southern catfish): 124401144
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Entry
124401144 CDS
T08004
Symbol
tbc1d22a
Name
(RefSeq) TBC1 domain family member 22A isoform X1
KO
K20360
TBC1 domain family member 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124401144 (tbc1d22a)
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
124401144 (tbc1d22a)
Retrieval pathways
124401144 (tbc1d22a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
CDC45
Motif
Other DBs
NCBI-GeneID:
124401144
NCBI-ProteinID:
XP_046729108
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All DBs
Position
18:complement(12453522..12636016)
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AA seq
564 aa
AA seq
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MASDGSKKQFWKRNTAKVPGSIQHVYGAQHPPFDPLLHANLIKAGNKPSATSTPGKPKKA
TTFQEFESITSDAWDVGDDDDELLAMAAQNLNIEVVMETANKVIENHSKQQELRQQQLDD
TPEPEEKDEEEEHDKDEEKRLEEEEETTTELPFSSERFHHTDSRLVKSHSEAPIGSPKEM
SGERAALYRQQSLPHRPVIPLVARMADQNTSGTPAMTEREAFRLDKFRQLLAGPNTDLEE
LRKLSWSGIPRQVRPITWKLLSGYLPANAERRASTLQRKRQEYFGFIEQYYDSRNDEHHQ
DTYRQIQIDIPRMNPERLVLQPRVTEIHIDIPRTNPLIPLFQQASVQEIFERILFIWAIR
HPASGYVQGINDLVTPFFVVYIFEYIEEEVENFDVSSLQEEVLRNIEADSFWCMSKLLDG
IQDNYTFAQPGIQRKVKALEELVSRIDETVHRHMQHYEVEYLQFAFRWMNNLLMRELPLR
CTIRLWDTYQAEPEGFSHFHLYVCAAFLVHWRKEILEERDFQGLMILLQNLPTMHWGNEE
VSVLLAEAYRLKFAFADAPNHYKR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgacggaagtaaaaagcagttctggaaaaggaacacagccaaggttcctggc
agcatacaacacgtttatggagcccagcatcctccatttgatcctctcctacatgctaat
ttaatcaaagctggaaacaagccgtctgccacgagcacgcctggaaagccaaagaaagcc
accaccttccaggagtttgagagcatcacgagcgatgcctgggacgtgggcgacgacgac
gacgagctcctcgccatggccgcacagaacctcaacatcgaggtggtgatggagacggct
aacaaggtgatcgagaaccacagcaagcagcaagaactacgacagcagcagctcgacgat
actcctgagcctgaggagaaggacgaagaggaggaacacgacaaagatgaagagaagagg
ctggaggaggaggaggagacaaccacagaactgccctttagctcggaacgttttcaccac
actgacagcaggctggtcaagtcccacagcgaagcacctattggatcgccaaaggagatg
agtggcgagcgggcagcactatacaggcagcagtcgctccctcacaggccggtcatcccc
ctggtggcccgcatggctgatcagaacacatcaggaactcctgcaatgacagagagagag
gctttcagacttgacaagttccgacagctactggctgggcctaacactgacctcgaagaa
cttcggaagttgagctggtcaggaattccacgtcaagtgcgccccatcacatggaagctt
ctctcaggttacctgccggccaatgccgagcgcagagccagcactctgcagagaaagagg
caggagtactttggtttcatcgagcagtactacgactcccgcaacgacgagcatcaccag
gacacctacagacagattcagatagatattcctcgcatgaatccggagaggttagtgctc
cagcccagagtcaccgagattcacattgacataccgagaactaatcctcttattcctctc
tttcaacaagcttctgtgcaagagatcttcgagcggattctgtttatctgggcaatccgg
cacccggccagcggatacgtacagggcatcaacgaccttgtcacgcccttcttcgtcgtc
tacatatttgagtatatcgaggaggaggtggaaaatttcgatgtttccagcttacaggaa
gaggtgctgcggaacatcgaggctgacagcttctggtgcatgagcaagctactggatggc
attcaggataactacacgttcgcccagccagggatccagagaaaagtgaaggctctggag
gagctggtgagccgaatcgacgagacagtgcatcggcacatgcagcattacgaagtggaa
tacttgcagtttgcattccgctggatgaataacctgctgatgagagagcttcctctgcgc
tgcaccatccgactgtgggacacctaccaggccgagcccgagggcttctcccacttccac
ctgtacgtgtgtgctgctttcttggtgcactggaggaaggagattttggaggaaagggac
ttccagggcctaatgatcctgctgcagaatttacccaccatgcactggggcaacgaggaa
gtgagcgtgctcctggccgaagcctacaggcttaagtttgccttcgcagatgcacccaat
cactacaaaagatga
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