KEGG   Silurus meridionalis (southern catfish): 124401152
Entry
124401152         CDS       T08004                                 
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124401152 (nup43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smeo03019]
    124401152 (nup43)
   03036 Chromosome and associated proteins [BR:smeo03036]
    124401152 (nup43)
Messenger RNA biogenesis [BR:smeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     124401152 (nup43)
Chromosome and associated proteins [BR:smeo03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    124401152 (nup43)
SSDB
Motif
Pfam: WDR55 WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_EML WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP WD_LRWD1 Beta-prop_IFT140_1st Beta-prop_DCAF4 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st KNTC1_N
Other DBs
NCBI-GeneID: 124401152
NCBI-ProteinID: XP_046729124
LinkDB
Position
18:complement(22421002..22426200)
AA seq 377 aa
MDMAAQMECVNAKYVSQKISKTRWRPVSAASLQQPEVFSTGSWDNENNKVCVWGVGEPAG
FTMEDELEGDPQLLCECEHAGDVLDLQFLDQDRLVTASSTGAVTVYKLHPDNQTLSVAHV
WDRAHRYQSANAPCTGVACNSPELISVGEDGRVILYKADQRGIVRAIENADNSTIHGVTF
LRTTEVLTVNSIGQLKLWDFRKQGSDPAQILALTGDRVPLHCVDRHPNQQHIVATGGQDG
MLCIWDVRQGNMPFSIMEAHSAEMWEVRFHPTNPDHLFTCSEDGSLLHWETSSGSDTPLF
LQGRNSSMMSRSATAPAGGNQSLISAWLNGDSSKGKLETTHMLPSQTLSVNSLDVLGQCL
VCGTDGEAVYVHRRVHV
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggacatggcggcgcaaatggagtgcgttaacgctaaatatgtttcccagaagatcagt
aagacgcgatggaggccagtttcagcagcttcactacagcagcctgaggttttctccacg
ggctcgtgggacaatgagaataataaagtgtgtgtgtggggtgtgggagaacctgcaggc
ttcaccatggaggatgaactggaaggagatccgcagcttctgtgtgaatgtgaacacgcc
ggggacgtgcttgaccttcagttcttggatcaagacagacttgtaacggcctcgtcaacc
ggagcagtgaccgtctacaaactccatcctgataaccagactctatctgtggctcatgtg
tgggatcgggcacaccgctatcagagtgctaacgctccctgtactggagtggcgtgtaac
agtccggagctgatttcagtaggcgaggacggaagagtcatcctctacaaagcagatcag
aggggcatcgtgcgagccatcgaaaatgcagacaacagcacgatccatggcgtgacgttc
ctgcggacgaccgaggtcttgacggtgaactccatcggccagctgaaactctgggacttc
aggaagcagggcagcgaccctgctcagatcctcgcgctaaccggggatagggttcctttg
cactgtgtggaccgacaccccaaccagcagcatatagtagccaccggaggccaagacggc
atgctgtgtatctgggacgtgaggcagggcaacatgcccttctccatcatggaggctcac
tccgctgaaatgtgggaggtgcgttttcacccgacaaacccagaccacttgttcacctgc
tcggaggacggctctctgctccactgggagacttcctcggggtctgacacacccttgttc
ctgcagggacgcaacagcagcatgatgtcccgcagtgccacggctcccgcaggtggaaac
cagtccctcatcagcgcctggctcaacggggactccagcaaaggcaaactggagaccaca
cacatgctccccagccagacgctctcggtcaacagcctggatgtgctcgggcagtgttta
gtgtgtgggaccgacggggaggctgtttacgtccacagacgtgttcatgtctga

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