Silurus meridionalis (southern catfish): 124401152
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Entry
124401152 CDS
T08004
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124401152 (nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124401152 (nup43)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124401152 (nup43)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124401152 (nup43)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124401152 (nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_DCAF4
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
124401152
NCBI-ProteinID:
XP_046729124
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All DBs
Position
18:complement(22421002..22426200)
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AA seq
377 aa
AA seq
DB search
MDMAAQMECVNAKYVSQKISKTRWRPVSAASLQQPEVFSTGSWDNENNKVCVWGVGEPAG
FTMEDELEGDPQLLCECEHAGDVLDLQFLDQDRLVTASSTGAVTVYKLHPDNQTLSVAHV
WDRAHRYQSANAPCTGVACNSPELISVGEDGRVILYKADQRGIVRAIENADNSTIHGVTF
LRTTEVLTVNSIGQLKLWDFRKQGSDPAQILALTGDRVPLHCVDRHPNQQHIVATGGQDG
MLCIWDVRQGNMPFSIMEAHSAEMWEVRFHPTNPDHLFTCSEDGSLLHWETSSGSDTPLF
LQGRNSSMMSRSATAPAGGNQSLISAWLNGDSSKGKLETTHMLPSQTLSVNSLDVLGQCL
VCGTDGEAVYVHRRVHV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggacatggcggcgcaaatggagtgcgttaacgctaaatatgtttcccagaagatcagt
aagacgcgatggaggccagtttcagcagcttcactacagcagcctgaggttttctccacg
ggctcgtgggacaatgagaataataaagtgtgtgtgtggggtgtgggagaacctgcaggc
ttcaccatggaggatgaactggaaggagatccgcagcttctgtgtgaatgtgaacacgcc
ggggacgtgcttgaccttcagttcttggatcaagacagacttgtaacggcctcgtcaacc
ggagcagtgaccgtctacaaactccatcctgataaccagactctatctgtggctcatgtg
tgggatcgggcacaccgctatcagagtgctaacgctccctgtactggagtggcgtgtaac
agtccggagctgatttcagtaggcgaggacggaagagtcatcctctacaaagcagatcag
aggggcatcgtgcgagccatcgaaaatgcagacaacagcacgatccatggcgtgacgttc
ctgcggacgaccgaggtcttgacggtgaactccatcggccagctgaaactctgggacttc
aggaagcagggcagcgaccctgctcagatcctcgcgctaaccggggatagggttcctttg
cactgtgtggaccgacaccccaaccagcagcatatagtagccaccggaggccaagacggc
atgctgtgtatctgggacgtgaggcagggcaacatgcccttctccatcatggaggctcac
tccgctgaaatgtgggaggtgcgttttcacccgacaaacccagaccacttgttcacctgc
tcggaggacggctctctgctccactgggagacttcctcggggtctgacacacccttgttc
ctgcagggacgcaacagcagcatgatgtcccgcagtgccacggctcccgcaggtggaaac
cagtccctcatcagcgcctggctcaacggggactccagcaaaggcaaactggagaccaca
cacatgctccccagccagacgctctcggtcaacagcctggatgtgctcgggcagtgttta
gtgtgtgggaccgacggggaggctgtttacgtccacagacgtgttcatgtctga
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integrated database retrieval system