Silurus meridionalis (southern catfish): 124401177
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Entry
124401177 CDS
T08004
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124401177
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
124401177
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
124401177
NCBI-ProteinID:
XP_046729190
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Position
18:17969282..17985379
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AA seq
858 aa
AA seq
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MGVNDLWSILSPVQESVPLYSLTGKTLAVDLSLWICEAQHVQGMMGKVTKPHLRNLFFRA
SSLLRMGIKLVFVMEGEAPKIKAETMSKRTEMGFRGSKTKSVSKPGTVKNTSRGRFKAVL
RECSDMLDYLGIPWVSAAGEAEAMCAFLDAQGLVDGCITSDGDAFLYGAQTVYRNFNMNT
KDPQIDCYKMSRIKTELQMKRETLVGLAVLLGCDYIPKGVPGIGKEQALKFIQNLKDTTL
LQKFSDWRKSTYDVQEFPVKKVTHCLVCRHPGSAKAHERSGCVFCGSEKFCQPQDYDSQC
PCDWHRTEHARQASSVETIIKKKTLACDMFPFTEIINEFLVPKDKPVNGFRRRKPNLLLM
QNFALDKMEWPKHYTSEKVLALMTYAELMNRNQGTQSSTQIQPIRIHKRRVRNGVSCFEI
VWRKPDHYVFPEDGPQDQSDVVSTVEEENLFTVAFPDIVQLFHKETAEAKDNKLKKKKPK
AEKEKAAVSSDRVTDLFAQMSLKSSCLEPVKSSEKGLETTPVLESDLDHCSIVPPSNLTV
HSHEIRSASEVSPSSQLAFPCHTGASSQAQTSLSVSVVINELHLSSIDWDAQSFTAAPSP
QTQHHKSDLQPANRSDEGTETRRSSNEAQSDCVELCRSSLMERVRLRNTVKCSGSGNNEE
KESVALSSEHKPLSENPKVPLLPLYQKSKLSRITALDSKQPKVSVPVLDPVPVRAPPKYK
FSKVKQLSRPSNDSNTERVWKTSVCRRQESSGDESEVENRPLTSQNQRKLKTINKPKSGI
QAQKHITQDRCNEWTNSVDTHHVADSTTPKKQPHITRTNPLKHTPTKNADDDDDDDDDDA
SICSPLPLAERLKLKLNK
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaacgatctgtggtcgatcctgagtccagtgcaggaatccgtcccgctgtac
agtctcacggggaaaactctggctgtggatctcagcctgtggatctgtgaggcccagcac
gtccagggcatgatggggaaagtcacaaaaccccacctacgcaatttgtttttccgcgcc
tcgtccctccttcggatgggcatcaagctggtttttgtgatggaaggagaagctcccaag
atcaaggccgagactatgagcaagagaacagagatggggttccgtggaagcaaaaccaaa
agcgtctcaaaaccaggaacggtcaaaaacaccagcagggggcgatttaaagctgtgctc
agagagtgttctgatatgttagactatttgggaatcccatgggtgtctgcagcgggcgag
gcagaggccatgtgtgcatttttggacgcgcagggtttggtggacggctgcatcacgagt
gatggcgacgcttttctgtacggcgcacaaaccgtctacagaaacttcaacatgaacaca
aaggaccctcagatagactgctataagatgtccagaataaagacggagctgcaaatgaag
cgagagacactcgtgggcctggccgtgctcctcggctgtgactacattcctaaaggtgtt
ccaggcatcgggaaagaacaagctcttaaatttatacagaatttaaaagacacgactctt
ctccaaaaattcagtgattggaggaaatccacttacgatgttcaggagtttcctgtgaag
aaggtcacccactgtctggtgtgccgtcaccctggttctgctaaagctcacgagcgcagt
ggctgtgtgttctgcggcagcgagaaattctgccagcctcaagactatgactcgcagtgt
ccctgtgactggcaccgcaccgagcacgctcgccaggcctcctcggtcgaaaccatcatc
aaaaagaaaactctggcctgtgacatgttcccttttacagagatcatcaatgaatttctg
gttccgaaggacaaacctgttaacggttttagaagacggaaacccaacctcctcctcatg
cagaattttgctctggacaagatggagtggcccaaacattacaccagtgagaaagttctt
gctctgatgacctacgccgagctcatgaacagaaatcaagggacacaatcgtcaactcag
atacaacccattcgaatacacaagcgacgcgtaaggaacggtgtctcctgcttcgaaatc
gtctggaggaaaccagatcattacgtgtttcctgaggacggccctcaggaccagtcggac
gtagtgagcaccgtggaagaggaaaacctgttcaccgtagctttcccagacattgtccag
ctcttccacaaggaaacagccgaggccaaggacaacaagttgaaaaaaaagaaaccgaaa
gcagaaaaagagaaggcggctgtttcctctgacagagtcacggatctttttgcgcagatg
tcactcaaaagttcatgtctcgaacccgtcaaatcctcagaaaaaggcttagagacgacc
ccagttctagagagtgatcttgaccattgttccattgttcctccatcaaatctcactgta
cactctcacgaaatccggtcagcctccgaggtctctccttcctcacagcttgcgttcccc
tgccatacaggagcatcatctcaagcccagacatccctttcagtatctgtagtgattaat
gagcttcacttgagcagcatagactgggatgctcagtccttcactgctgctccatctcct
cagactcaacaccataaatccgatctacaaccggcgaacagatcagacgaaggaaccgaa
acgcgacgctcatctaatgaagcgcagtcggattgtgtggaattgtgtcgaagttcactg
atggaaagggtccgcttaaggaacacggtaaagtgttctggctctgggaataatgaagag
aaggaatcagttgctttaagttcagagcacaagccattatccgagaatcctaaagtacct
cttctgccactgtaccaaaaatcaaagctaagcagaatcacagctcttgattcaaagcag
cccaaagtgtctgttcctgtcctggacccggtcccggtccgggctccaccaaaatacaaa
ttttccaaggtgaaacaattgagcagaccgtccaacgattcaaatacagaaagagtgtgg
aagacgagcgtttgtcgaagacaagaatcttccggcgatgagagtgaggtggagaatcgg
ccgttaaccagtcagaaccaacgcaaactaaaaaccatcaacaaacctaaatcagggatt
caggcacaaaaacatattacacaggacagatgcaacgagtggacaaattctgtagacaca
caccatgtggcagattccacaacgcctaaaaaacaaccgcacatcacgcgaacaaatcct
ctcaaacatacgcccacaaaaaacgctgatgatgacgacgacgacgatgatgacgatgca
tcgatttgtagccctttgccacttgctgagaggctgaaactgaaacttaacaaataa
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