Silurus meridionalis (southern catfish): 124401184
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Entry
124401184 CDS
T08004
Symbol
cand1
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124401184 (cand1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124401184 (cand1)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
124401184 (cand1)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124401184 (cand1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EF3_N
HEAT_EZ
HEAT_2
TOR1L1_N
HEAT
MMS19_C
UME
Adaptin_N
Vac14_Fab1_bd
Cnd1
CLASP_N
mTOR_dom
HEAT_DAAF5
ARM_ARMC5
RIX1
VHS
Tti2
Dcc1
Vps35
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
124401184
NCBI-ProteinID:
XP_046729207
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All DBs
Position
18:8915003..8935613
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AA seq
1230 aa
AA seq
DB search
MASASYHISNLLEKMTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMILKLLEDK
NGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPA
SSGSALAASVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLCRQGGLLVNFHPSILSCM
LPQLTSPRLAVRKRTIIALGHLVMSCGNLVFVDLIEHLLSELSRNDSMSTTRTYIQCIAA
ISRQAGHRIGEYLEKIIPLVVKFCNIDDDELREYCIQAFESFVRRCPKEVYPHVPTVINI
CLKYLTYDPNYNYDDEDEDENAMDADGVDEDYQGSDDEYSDDDDMSWKVRRAAAKCLDAV
VSTRHEMLPEFYRTVSPALIARFKEREENVKADVFHAYLSLLKQTRPAQSWLCDPDAMEQ
GETPLTMLQSQVPMIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLIPGI
IFSLNDKSSSSNLKIDALSCLYVILCNHQPQVFHPHVQALVPPVVACVGDPFYKITSEAL
LVTQQLVRVIRPLDLSDVFDASPYISDLFACTIKRLKAADIDQEVKERAISCMGQIICNL
GDSLGSDLPGTLCIFLERLRNEITRLTTVKALTLIAGSPLKIDLRPILADAVPILASFLR
KNQRALKLSTLAALDILVKNYSDSVTPAMIDAVLDELPPLISESDMHVSQMAISFLTTLA
RVHPDSLAKISGSILPELIALVRSPLLQGGALGAMLEFFQALVGTGTASLGYMDLLRMLT
SPVYAQSTSLTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALL
SLGEVGHYVDLSGQPELKTVILDAFSSASEEVKSAASYALGSISVGNLPEYLPFVLQEIS
GQPKRQYLLLHSLKEIISSASVGGLKPYVESVWTLLLKHCECTEEGTRNVVAECLGKLTL
IDPETLLPRLKGYLLSGSSYARSSVVTAVKFTISDHPQTIDPLLKNCIGDFLKTLEDPDL
NVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLD
IRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFLMLARLSSLCPSAVLQ
RLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQS
QISSNPELAAIFDSIQRDSSSANMESMDTS
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcctcgtaccacatctccaacctgctggagaagatgacttccagcgacaag
gatttcagattcatggccacaaatgacttaatgtccgagctgcagaaggattccatcaag
ctggatgatgacagcgagaggaaagtggtcaagatgatcctcaaacttcttgaagacaaa
aacggagaagtacaaaacctggcggtgaaatgtttgggaccactcgtcagcaaagtaaag
gagtaccaggtagagacgatcgtggacacattgtgcacgaacatgctgtctgataaagag
cagcttcgagacatttccagcattggactgaagacggtgatcggggagcttccaccagca
tctagcggctctgcccttgctgccagtgtttgtaaaaagataacaggtcggctcacaagt
gccattgccaagcaggaggatgtgtcggtgcagcttgaagctctggatatcatggctgac
atgctgtgcagacaaggaggcctgctggtgaatttccacccttccatcttgagctgcatg
ctgccccagttgaccagtcctcggctggctgtgaggaagaggaccattatagctctgggt
cacctggtcatgagctgtgggaacctcgtcttcgtagacctcattgagcacttactgtcc
gagctctcgcgcaacgactcgatgtccaccactcgcacttatatccaatgcatcgccgcc
atcagccgacaagccggccacagaattggcgagtacttggagaagatcattccattagtg
gtgaagttctgtaacattgatgatgatgaactgagggaatactgcatacaagcctttgag
tccttcgtcaggaggtgtccaaaagaggtttacccccatgtcccaacagtcatcaacatc
tgcctcaagtacttaacctacgaccccaactacaactatgatgatgaggacgaagatgag
aatgcaatggatgctgacggtgttgatgaagactaccaaggaagtgatgatgaatatagc
gacgacgatgacatgagttggaaggtgcggcgagcggcagctaaatgcctggacgccgtg
gtgagcacccggcatgagatgctgcctgagttctaccgtacagtctccccagcacttatc
gcccgctttaaggaacgtgaggagaacgtaaaggctgacgtgttccacgcctacctgtcc
ctgctcaaacagacacggccagcccagagctggctgtgtgaccctgacgctatggaacaa
ggcgagactccactcacaatgctccagagccaggtgcccatgatcgtgaaagcactgcat
aagcaaatgaaggagaagagtgtaaagaccaggcagtgctgcttcaacatgctgaccgag
ctggtaaatgtgctccctggggctctgactcagcacatccctgtgctcatcccaggaatc
atcttctctctaaatgacaaatcaagctcctctaatctgaagattgatgcattgtcctgt
ttatatgtgattctgtgcaatcaccagcctcaagtcttccacccccatgttcaggccttg
gtgccccctgtagtggcttgtgtgggcgatcccttttacaagatcacctcagaagccttg
ctagtcacccagcagctggtgcgggtgatccggcccctcgacctgtcggatgtgtttgat
gcgtctccttacattagtgacctcttcgcctgcaccatcaaacgtctcaaggcagctgac
attgatcaggaggtcaaagagcgtgccatctcttgcatgggccagatcatctgtaacctt
ggtgacagtctgggttcggacctcccaggcacgctctgcatctttctggagcggctcagg
aacgagattaccagactgactacggtcaaagctctgacgttgattgctggctcaccactg
aagatcgacctacgtcccatcctagccgatgcagttccgatcctggcctcgtttctgcgc
aagaaccagcgagcactgaagttgagcactttggcagccctggacatactggttaagaac
tacagtgacagtgtgacaccagccatgattgatgctgtgctcgatgagctgccaccgctc
atcagtgagagtgacatgcatgtctcacaaatggccatcagcttcctgaccacactggct
cgtgtgcacccagactctcttgccaagatcagtggttccatcctcccggagctcattgcg
ctggtgcgctcaccactgctgcagggcggcgcgcttggtgccatgctagagtttttccaa
gctcttgtgggcactggcacggccagcctgggttacatggacctgctgcgcatgctgaca
agccctgtgtatgcacagagcacctcgctcacccacaagcagtcatactactccatcgcc
aagtgtgtggcggccctcacccgtgcctgccccaaagagggccctgccgttgtcggccag
tttatccaggatgtcaagaactcgcgctctactgactccatccgcctgctggccttgctc
tccctgggtgaagtgggccactatgtggacctgagtggccaacctgaactcaaaacggtc
atcctggacgccttctcctctgccagcgaagaagtgaagtcagctgcctcctacgctctt
ggcagcatcagtgtgggcaacctgcctgagtacctgcccttcgtgctgcaggagatctca
ggccaacctaagcgccagtacttgctgcttcactcgctcaaggagatcatcagctctgca
tcagtaggtggtctcaagccgtacgtggagagcgtgtggactctgctgctcaaacattgt
gagtgtacagaggagggcacccgcaacgtggtggcagaatgcctgggcaagctcacactt
atagaccctgagaccctgttgccaaggctaaaaggctatctgttatcagggtcgtcttat
gccagaagctcagtagttactgctgtcaagtttacaatttcagaccacccacagacaatt
gatcccttactgaaaaactgcataggcgatttcctgaaaacattggaagacccagatctt
aatgtacgaagagtggcccttgtaacattcaactctgcagcccataataagccctcgctt
attcgagacctcctggacactgttcttcctcacttatacaatgagaccaaagtgcgcaaa
gagctgattagagaggttgaaatgggtccattcaagcacacggtggatgatggcctggac
atacggaaggctgctttcgagtgtatgtacactcttctagacagttgccttgacagactt
gacatctttgagtttcttaaccatgtcgaggacggactcaaagaccattacgatatcaag
atgctgacattcctgatgctggctcgtctctcttcactgtgtcccagtgctgtactgcag
aggctggacagactggtagagcctcttagagccacatgtactacaaaggtaaaggcaaac
tctgtaaagcaggagtttgaaaagcaggatgagctgaaacggtcagccatgcgggcagtg
gcggctctgctcaccatccccgaggcagagaagagccccctgatgagtgagtttcagtca
cagatcagctccaatcctgagctcgcagccatcttcgacagtatccaaagggactcgtcg
tcggccaacatggagtccatggacaccagttaa
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