Silurus meridionalis (southern catfish): 124401227
Help
Entry
124401227 CDS
T08004
Symbol
rad51
Name
(RefSeq) DNA repair protein RAD51 homolog 1 isoform X1
KO
K04482
DNA repair protein RAD51
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03440
Homologous recombination
smeo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124401227 (rad51)
03460 Fanconi anemia pathway
124401227 (rad51)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124401227 (rad51)
04121 Ubiquitin system [BR:
smeo04121
]
124401227 (rad51)
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124401227 (rad51)
Membrane trafficking [BR:
smeo04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124401227 (rad51)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
124401227 (rad51)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
124401227 (rad51)
RecA family proteins
124401227 (rad51)
FA (Fanconi anemia) pathway
Other FA pathway factors
124401227 (rad51)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
RecA
HHH_5
ATPase
HHH
AAA_22
PAXNEB
AF1548-like_C
Motif
Other DBs
NCBI-GeneID:
124401227
NCBI-ProteinID:
XP_046729288
LinkDB
All DBs
Position
18:27510075..27517541
Genome browser
AA seq
376 aa
AA seq
DB search
MTSEASACLRMRKSGRAGKFSVSSAACGCVARAEVVEMAMSVSRVEVEADVEEEESFGPQ
PLTRLEQCGISASDLKKLEDAGFHTIEAVAYAPKKELLNIKGISETKADKILGEAAKLVP
MGFTTATEFHQRRAEIIQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVT
CQLPIDQGGGEGKAMYIDTEGTFRPERLLAVAERYGLVGSDVLDNVAYARAFNTDHQTQL
LYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQCHLGRFLRMLLRLADEFGVAV
VISNQVVAQVDGAAMFSADPKKPIGGNILAHASTTRLYLRKGRGETRICKIYDSPCLPEA
EAMFAINADGVGDAKD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagaggcctctgcgtgcctacgtatgcggaagtctggtcgcgcgggaaagttc
agtgtgagttcggcggcttgtggatgcgttgcgcgcgctgaggtggtggagatggcgatg
agtgtgagtcgagtggaggtcgaggctgatgtggaggaggaggaaagcttcggtccacag
cctctgacccgtctggagcagtgtgggatcagtgcgagtgatctgaagaagctggaggat
gcagggttccacaccatcgaggccgtggcctacgctcctaaaaaagagctgctgaacatc
aagggcatcagtgagaccaaagctgacaagatcctgggtgaggcggctaagctggttccg
atggggttcaccacagcgacagagtttcaccagcgcagagccgagatcattcagatctcc
accggctccaaagagctcgacaaactgctgcagggtggtattgagacgggctccatcacg
gagatgtttggggagttccgtacagggaagactcagctgtgccacacactggcagtgacg
tgccaacttcccatagaccagggtggaggagagggcaaggccatgtacatcgacactgag
ggcaccttcagacccgagagactgctcgctgtggccgagaggtacgggctggttggcagt
gatgttctggataatgtagcttatgctcgagcttttaacacggaccatcagactcaactg
ctctatcaggcttcagctatgatggctgagtccaggtatgctctgttgatagtggacagt
gccactgcgctctacaggacggattattcaggacgaggcgagctctcggcccgtcagtgt
catttgggacgtttcctccgcatgctgctgcgtctcgctgacgagtttggcgttgctgtg
gtcatcagtaatcaggtggtcgcgcaggtggacggagcggccatgttctccgcagatcct
aaaaaacccatcggaggaaatattttagcgcacgcctccaccaccaggctgtatttgagg
aaggggcgtggtgaaactcggatctgtaagatttacgactctccctgcttacccgaggcc
gaggccatgttcgccatcaacgcagacggagtcggagacgctaaagactaa
DBGET
integrated database retrieval system
