KEGG   Silurus meridionalis (southern catfish): 124401239
Entry
124401239         CDS       T08004                                 
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
  KO
K05636  laminin, beta 1
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04510  Focal adhesion
smeo04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124401239 (lamb1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124401239 (lamb1b)
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMININ_IV_B EGF_LMN_ATRN LAMB1 F5_F8_type_C Glu_dehyd_C DAPDH_C
Other DBs
NCBI-GeneID: 124401239
NCBI-ProteinID: XP_046729324
LinkDB
Position
18:15019120..15068677
AA seq 1774 aa
MRILHWAMILALGLAVQAQLLPEANNMCSEGSCYPATGDLLIGRAHRLTASSTCGLYSPE
HFCIFSSLAAEKCFECDSRDLYNEVTHPNSHTIDNVVTTFTPNRLVTWWQSENGVENVTI
QLDLEAEFHFTHIIMTFKTFRPAAMVIERSSDFGQTWKVYRYFASNCSASFPHISQGPVK
SVDEVICDSRYSSIEPSTEGEVIYRALDPIFKIPDPYSQGIQNFLRITNLRMRMVKLHML
GDNLLDGGDEVKNKYYYALYDMVVRGNCFCYGHSSECAPGDDSEDGPEGMVHGKCVCNHH
TSGLNCERCQDFYQDVPWRPAEGRNTNECKKCECNQHSNACHFNMAMYVASGNRSGGVCD
DCQHNTQGQHCEGCKPFYYQHPNRDIRDPHICERCDCDIWGSLNGGVCDSATDVMRGLIA
GQCRCKENVEGERCDHCKRGYYGLSQDMLGCLPCSCNPLGTLPGGNPCDTDTGICYCKRL
VTGRNCDRCQPQHWGLSTDKDGCRPCDCDLGGALNNDCSPHTGQCVCREHMSGRRCNTLN
PGYYFTALDHYTYEAEEAAFGPAVTVVTRPIPRPADRHPTWTGVGFAKVPERETLQFTID
NIPQSMDYDLLIRYEPQLPEVWEQVRVDVTQPAYPLTPAKCLGSFSDHQTISLPPGSRYM
VLSRPLCLEKGEKYTVKLNLSHFSSNDFHHQPHILIDSIVLLPVVRDLEMFSGSADGEAA
WEMFQKYRCLENSKSVQKLPMNDICRGYIFSASALLQQGAMECECDLLGSNSTMCDPNGG
QCLCRKNVIGRKCNSCAPSTFQLEPSGCRPCECDPLGSKNPFCNSTTGQCLCLPGVYGRQ
CAHCLPRHWGFPHCQQCFCNGHGEHCHPQTGQCLECRDHTTGDQCERCKTGYHGNALIGS
TDRCRPCMCPDGPDSGRQFADTCYQNPTSLQLVCVCSQGYKGPRCEDCAPGYYGNPQVSG
GRCHPCQCNGNINMHDPLSCDARTGICLRCLHNTEGQACQHCRRGYYGDASTQNCQRCMC
QPLGTDSSRCVDGECQCNQVSGQCPCLPNVEGLHCDHCAPNTWNFNSEEGCQSCQCHPTH
SYSQSCDVVSGQCVCMPGFGGRTCDECRPLFWGDPEVRCHACDCDPKGTATPQCNKTSGA
CVCVEGVGGPRCDSCGRGYVGTFPDCQPCHQCFREWDVTVGELTNQTQQLVDTVEQLKVT
GVTAAYQETIDSLEGGAKQITQILEDDKAQKTLRHSQELLQQAKSIMTDLEPSLNHSEVD
VKQTAEEHRRVAKELITLSVDIQKQQESFNNTQQQVLRIKHSDAVGAVDSIREYYQETVE
AESQVNRTTTGSHSHLEQSASRRKATEVRLKAEEGEFDQKQRLDTQILNTLNQDLERDEL
SQLSEKVCGGKWSPNGCGECGGLGCVTEDGKHQCGGQDCKGVLTQTNNAWKKAKDLDKDI
MDSLKEVEKLQRMVSTAQGRAEESKSSAQEIQEKANKNKAKVEQTNQELRELIQQIRDFL
TSGTDLERIEALSDEVLKMKMPVFVGELKNVTSEIRQHVASLTSVDDVLAQSSEQAQTAE
RLLQQARSISEEATQLREKVDKVKAALNESEHAQSVANDSLNATKSDLVYIKQQIKTVES
KTVASEFMLSNTTHRLLDLEKNVVAVEQKTRESFDSAQSAENKADYVSDDTDQTKRKLDL
EVQPKFQSVRGLMEEKAFGVSDARQRAERLQEEAKNLAADVVTKLSNLNELERMFSVNQK
TLAERAAEIEELEKEAQAVLQELSQTVTVYSTCL
NT seq 5325 nt   +upstreamnt  +downstreamnt
atgcggattttacactgggccatgattctggcgttaggtttggctgtccaggcacagctt
cttcctgaagccaacaatatgtgttcagagggaagctgttaccctgccacaggcgacctg
ttgatcggcagagctcatcgccttacagcctcgtcaacctgtggactttactctcctgaa
cacttctgcatcttcagcagcctagcggctgagaagtgttttgagtgtgactctcgggac
ctctacaatgaagtcacccatcccaacagccacaccatcgacaacgtggtcacaaccttt
actcctaaccgtctcgtaacttggtggcagtcagagaacggagtggagaatgtgactatt
caactggacttagaagcagaattccactttacccatatcatcatgacctttaagacattt
cgtcctgcagcgatggtgattgagcgttcatcagattttggacagacctggaaggtgtac
cgttactttgcatctaactgctcagcttcctttccacacatctcccaaggaccggtcaag
agtgttgatgaggtcatctgtgattcacggtactctagcatcgagccttcaacagaggga
gaggtgatttaccgagcacttgaccctatatttaagattcctgatccctacagtcaagga
atccaaaacttcctgagaataactaacctgcgaatgcggatggtgaagctacacatgctc
ggcgataaccttctggacggaggagatgaggtgaagaataaatactactatgctctctat
gacatggttgttcgtggcaactgcttctgttatggtcactcctccgagtgtgcaccaggg
gacgacagcgaggatgggcctgaaggcatggtccacggcaaatgtgtgtgcaatcatcac
acgtctggattaaactgtgagaggtgtcaagacttttatcaagacgtcccatggagacct
gcagagggcagaaacacaaatgagtgcaagaagtgtgagtgtaatcagcactcaaatgcg
tgtcacttcaacatggcgatgtatgttgcatcggggaacaggagtggaggagtgtgtgat
gattgtcaacacaacactcaggggcaacactgtgagggatgcaagcccttctactaccag
catcctaacagggacataagagaccctcacatctgtgaacggtgtgactgtgacatatgg
ggctcactgaacggcggtgtgtgcgacagtgcgactgacgtgatgagaggactaatcgcc
ggtcaatgtcgctgtaaggagaatgtggagggagaacgctgcgatcactgcaaacgagga
tactacgggctcagccaagacatgctaggctgccttccatgcagctgtaatcctctgggt
actcttcctggaggaaatccctgtgacacagatacaggaatatgttattgcaaacgcctt
gtcactgggcgaaactgtgatcggtgtcagcctcagcactggggcctgagcaccgataag
gatggctgtcggccatgtgactgcgatctcggaggagctctgaacaacgattgttctcca
catacagggcagtgtgtgtgtcgagagcacatgtctggcagacgctgtaacaccttaaac
cccggatattatttcactgcccttgaccactacacttatgaggcagaggaagctgcattc
ggaccggcagtgacagtggtgacgaggcctattcctcggcctgcagatcgacacccaacc
tggactggtgttgggttcgccaaagtacctgaaagagaaaccctgcagtttaccattgac
aacattccacagtctatggattatgacttgttgatccgctatgaacctcagttacctgaa
gtgtgggagcaggtgagagtagatgtgacacagcctgcttatcctctcacgcctgcaaaa
tgtttaggttcattctctgaccatcagaccatctcacttcctcctggctccaggtatatg
gtcttgtccaggccactgtgtttagaaaagggcgagaaatacacggtgaaattaaatctg
tcccatttctcatcaaatgattttcatcaccagccacacatcttgattgactctattgtg
ctgttgcctgttgttcgagatctggaaatgttctcaggatcagctgacggagaggcggcg
tgggaaatgtttcagaaataccgctgtctcgagaacagcaagagcgtccagaaattaccc
atgaacgacatctgcagaggatacatcttcagcgcgtcagctctgcttcaacagggagct
atggaatgtgagtgtgacctactaggctctaacagtacgatgtgtgatcctaatggtggc
cagtgcctatgcaggaaaaatgtgataggcaggaagtgtaacagctgcgccccaagtacc
ttccagctggaaccttcaggctgcaggccatgtgagtgtgacccactgggctcaaagaac
cctttctgcaattcgaccacaggccagtgcttgtgtttacccggtgtttatggacgtcag
tgtgcccactgtctccccaggcactggggcttcccacactgccaacaatgcttctgtaat
gggcacggggagcactgtcaccctcaaacaggccagtgcttagagtgcagagaccacacc
acaggagaccagtgtgagaggtgcaagactggttaccacggcaatgcgttaataggcagc
actgaccgctgtcggccctgtatgtgtcctgatggcccggacagtggaagacagtttgca
gacacctgctaccaaaaccctacttcactccagcttgtctgtgtgtgcagccaaggatac
aaaggaccaaggtgtgaggactgtgcacctggttactatggcaacccacaggtgtcaggc
ggacggtgccacccatgccagtgtaatggcaacataaacatgcacgatccgttgtcctgt
gatgcccgcacagggatctgtctcagatgcctgcataacactgaaggccaggcgtgtcag
cattgtcgccgtggttactatggagatgctagcacccagaactgccagaggtgcatgtgc
cagcctttgggtactgacagttccaggtgtgtagacggtgagtgtcagtgtaaccaggtg
agtgggcagtgcccatgcttacccaatgtagagggtctgcactgtgaccactgtgcccct
aacacctggaacttcaacagtgaagaaggctgccagtcatgccagtgtcatcccacacac
tcttatagccagtcctgcgatgtagtgtccggtcagtgtgtctgtatgccaggatttggt
ggtaggacctgtgatgagtgtaggcctctgttctggggtgatccagaagtcaggtgtcat
gcatgcgactgtgaccccaaaggcaccgctacaccacagtgtaacaaaacgtcgggagca
tgtgtgtgtgtcgagggtgtgggcggaccccggtgtgactcatgtgggcggggctatgtg
ggaaccttcccagactgccagccatgtcatcagtgcttccgtgaatgggatgtcacggtg
ggagagctgaccaatcagacgcagcagttagtggacacggtggaacaactgaaagttaca
ggtgtgacagcagcctatcaggagacaatagacagcctggaaggcggagccaagcaaatc
actcagatactagaggatgataaggctcagaaaactcttagacactctcaagagcttctg
cagcaggccaagagcatcatgactgatctggaaccctctctgaaccattcagaggtggat
gtaaagcagaccgctgaggaacatcgcagggttgcaaaggagcttattacgctcagtgtg
gatattcagaagcaacaagaaagctttaataacacacagcaacaggtgctgcgcatcaaa
cactccgacgcagtgggtgcagtagacagtattagggaatattaccaggagacagtagag
gcagaaagtcaagtcaatcggaccaccacaggttcacacagccatttggagcagtcagcg
agtcgacggaaagccacggaggtcagactgaaagccgaggagggagagtttgatcagaag
caacgattggacactcagatactgaacacactaaaccaggatctggagcgagatgagctt
tcacaacttagtgagaaggtgtgtggtggaaagtggagtccaaacggctgtggagaatgt
ggaggtttggggtgtgtgactgaggatggaaaacatcagtgtggaggacaggactgtaaa
ggtgtgcttacccaaaccaacaatgcatggaaaaaagctaaagacctggacaaggacatc
atggactcactaaaagaagtggaaaagctccagaggatggtttctactgctcaaggacgt
gcagaagagagtaaaagcagcgcacaggagatccaggagaaagccaataagaacaaagca
aaagttgagcagaccaatcaggagctgcgagagctcattcagcaaataagagactttctt
acaagtggaacagatctggagcgtattgaagcactatctgatgaagttctgaagatgaag
atgccagtgtttgttggcgagctgaagaacgtgacgtcagagatccggcagcacgtggcc
agtctgaccagcgtggacgatgtcctggctcaaagttctgaacaggcacaaacagctgaa
agactgctgcaacaggcacgctctataagtgaggaagctacacaactgagggaaaaagtg
gacaaagtgaaggcggcactaaacgaatcagagcacgctcagtctgtagcaaacgacagc
ttgaatgcaaccaagagtgaccttgtctacataaaacaacaaataaaaactgtggaatct
aaaacagtggcgtctgagtttatgttgagtaacaccactcatcggttgctggatcttgag
aagaacgtggttgcagtggaacagaaaactcgagaatccttcgacagtgctcaaagtgct
gaaaacaaggcagactatgtctctgacgacacggaccaaaccaaaaggaaactagattta
gaggttcagcctaagttccagtcggttcgaggcctgatggaggagaaagcattcggtgtg
tctgatgcacgacagagagcagaacgactgcaagaagaagcgaagaacttagctgctgat
gtcgttaccaaattaagtaatctaaatgagctggagcggatgttctccgtgaatcagaag
accctggcggagagagcagcagagatagaggagctggagaaagaggcccaggctgtgcta
caggaactcagccagactgtcacagtctacagcacctgtctgtaa

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