Silurus meridionalis (southern catfish): 124401261
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Entry
124401261 CDS
T08004
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124401261 (gtf3c2)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
124401261 (gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_DCAF12
WD40_WDHD1_1st
WD40_Prp19
EBNA2_Core
Beta-prop_WDR11_1st
SHKBP1_KCTD3_C
ASA1
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
124401261
NCBI-ProteinID:
XP_046729368
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All DBs
Position
18:complement(21614941..21634205)
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AA seq
861 aa
AA seq
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MGVPYKNDSQDLIQSNNVMDSGTDGDMDGETPGTKVLQESNNTPDVMYEGHTPASPQGSS
ETQQEVLPLQNKPRKRGRPRKTVKNSEDNGPVEIKSVASEARVDHDSSAISESSEMTPSG
RPKRRAAKAALEYLHNISKDLEISEMSFVSKEQNGLEQPSSPSPRTPSGRGRGRGRGRGR
GRGQKRNAPDYNSNPNDDDDFDPGDHGEVESEEEDEDEDYKDSVPCKQPYKVKKLPFNHK
VIGYNGLASCVMQLVWESFRKTKEFRDKHFSSWVFPDWIPSLSDWHLLSSSEAEKYLPQE
KESMAFTLSREGLKGPEMLQRVKRFESTVPNPERWDSLFFAGGPVWAMEWCPVPEGAAHT
QYAAVYCNRNMDDRHKMNALHTEDALLQVWDLGKLGMSRPSSSPSLAYALAVDDGCIWNM
KWCPAGAWELPTTVRKAPQVPRLGLIAAAFSNGHVGVFSLPHPEHVNGARGGSSQASLIY
RVQRIMSVKVGSSQVDHSSQTGLCFALDWLPVKPHNILAAGFCDGTVALWDLSTRSPLLR
VRSTDRSLSLYPYHCFLAHDNTIRRLSWCRASSELMVTVGDDRMVKLWNVTKTCTPLKTV
KRFLPTDVSWPLFWAGTFLTQESCYATSGQQGLHYLDSGYFGQKPLFVCTRKATVWSVSM
SDWMNSCVMGDNIGEFVCSVLCDPNCNYSNSKRHRFPVYRAEMVEFEPSQKHQDAEQEDD
QEMDEGGLNQQEPQTYRGAVRKYYLRFHDMDLRSFKKYQQKPILKQLQASETKGLLYVDQ
MPLNALYKVCFNPNMDAHAWVLSSGQSGLVRVHCVSGLDGPVMEKLISEAQYQFSTMFCS
QENDASPTIVQQSTVETVQVP
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgggggttccctacaaaaacgactcccaggatctgattcaatccaataacgtcatggac
agtggaactgatggagacatggatggagaaaccccagggaccaaagtgcttcaagagtct
aataacacacctgatgtgatgtatgaaggacacacaccagccagtcctcagggttcctcc
gagacccagcaggaggttttacccctgcagaacaaaccacgtaaaagggggcgtccaaga
aaaacagtaaaaaacagtgaagacaacggtccggtggaaataaagtcggttgccagtgaa
gcacgtgttgatcacgacagctctgccatttcagaaagctcggagatgactccatctgga
cgccctaagagaagagcggccaaagcggccctggagtacctccacaatatcagcaaagac
ctcgaaatatccgaaatgtccttcgtgagtaaagagcaaaatgggctggagcagccaagc
agtccttccccgagaaccccctcaggaagaggaaggggacgaggaagaggaagaggaaga
ggaagagggcagaaacggaacgctccggactacaacagcaatccaaacgatgacgacgac
ttcgaccccggtgaccacggcgaggtggaaagtgaggaggaggatgaggatgaagattac
aaagattcagtgccgtgtaaacagccatataaagtaaagaagctgccgtttaaccacaag
gtgatcggatataacgggctcgccagctgtgttatgcagcttgtttgggaatccttcagg
aaaaccaaagaattccgtgataaacatttctcctcgtgggtgtttcctgactggattcct
tcactcagcgactggcacttgctgtcctccagcgaagcggaaaaatatttacctcaggag
aaggagtcgatggcttttacgctaagccgcgaaggactcaagggaccggagatgctgcag
agggtgaaaaggtttgaatccacggtgccgaacccagaaagatgggactcgctgttcttc
gccggaggccctgtctgggccatggagtggtgtcccgtccccgaaggtgccgcccataca
caatatgcagcggtttattgcaaccgaaatatggacgaccggcacaaaatgaacgcgctt
cacaccgaagacgctctgctccaagtgtgggatctgggaaagctagggatgagtcgcccc
tcgtcatccccaagcttggcctacgccctggcggtggacgatggttgcatctggaacatg
aagtggtgtcctgcaggagcttgggagcttccaacaacggtcagaaaggctcctcaagtg
cctcggctcggactgatagccgcagcattttccaatggacacgtcggtgttttcagtttg
ccgcatccagagcatgtaaatggcgccagaggtggaagcagtcaggcttcactgatctac
agggtgcagcgcatcatgagcgtgaaagtcggatcgagccaggtggatcacagcagccag
accggactgtgttttgctctcgactggctcccagttaaaccacacaacatcctggctgca
ggtttctgtgatggtacggtggctttgtgggatctcagcaccaggtctcctttgcttaga
gtccgatctacggaccgatctctctcgctctacccgtaccactgctttttggctcacgac
aacaccatccgccgcctcagctggtgcagggcttccagtgagctgatggtgaccgtagga
gatgatcgcatggtcaaactgtggaacgtgactaaaacctgcactcctctgaagacagta
aagcgcttcctgcccactgatgtgtcctggcctttgttttgggcggggacttttctcact
caggagtcttgctatgccacgtccggccaacaaggacttcactaccttgactcaggatac
ttcggtcagaagcctttatttgtttgtacaagaaaagcgaccgtatggagcgtctccatg
tccgactggatgaactcctgtgtaatgggggacaacattggagagtttgtttgctcagtg
ctctgtgacccaaactgcaactacagcaacagcaagagacatcgatttccggtgtacagg
gcggagatggtggagttcgagcctagtcagaaacatcaggatgctgagcaagaggacgac
caggagatggatgaaggtggcttgaaccagcaggagccccagacctacagaggcgctgtg
aggaaatactacctccgcttccatgacatggaccttagatcttttaaaaaatatcagcag
aagccgatactgaagcagctccaggcctccgagacgaaaggcctgctgtatgtggatcag
atgcctctgaatgcgctctacaaggtgtgctttaatccgaacatggacgctcacgcctgg
gttctgtcgtccggtcaatctggactcgtacgtgttcactgcgtcagcggcctggacggc
cccgtcatggagaaactcatcagtgaagctcaataccaattcagcaccatgttctgctct
caggaaaacgacgcatcgccgacgatcgtccagcagtccacggtggagaccgttcaagtg
ccctag
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