Silurus meridionalis (southern catfish): 124401296
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Entry
124401296 CDS
T08004
Symbol
ehd3
Name
(RefSeq) EH domain-containing protein 3
KO
K12476
EH domain-containing protein 3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124401296 (ehd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124401296 (ehd3)
Membrane trafficking [BR:
smeo04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124401296 (ehd3)
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Gene cluster
GFIT
Motif
Pfam:
DUF5600
EH
EHD_N
Dynamin_N
MMR_HSR1
EF-hand_1
GTP_EFTU
Gtr1_RagA
EF-hand_7
AAA_16
AIG1
CpxA_peri
AAA_22
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
124401296
NCBI-ProteinID:
XP_046729434
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Position
18:21877801..21894281
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AA seq
535 aa
AA seq
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MFSWLGTDDRRKRDPEVFHTVGEGLKKLYKTKLLPLEEHYKFHEFHSPALEDADFDNKPM
VLLVGQYSTGKTSFIRYLLEQDFPGMRIGPEPTTDSFIAVMHGDIEGQIPGNALVVDPKK
PFRKLNAFGNAFLNRFVCAQLPNPVLESISIIDTPGILSGEKQRISRGYDFAAVLEWFAE
RVDRIILLFDAHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSL
GKIVNTPEVIRVYIGSFWSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKR
ARLAKVHAYIISSLKKEMPSVFGKDNKKKELINSLGEIYSRIEKEHQISPGDFPNLKRMQ
EQLQSHDLNKFQVLKPKLLDAVDDMLAHDIAQLMVLVRQEETQKPGQVVKGGAFEGTMNG
PFGHGYGEGAGEGIDELEWVVARDKPTYDEIFYTLSPVNGKVTGANAKKEMVKSKLPNTV
LGKIWKLADIDKDGMLDDEEFALANHLIKVKLEGHELPSELPSHLVPPSKRKLPE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctggctggggacagatgacaggagaaagagggaccctgaggtgttccacacc
gtcggtgagggactcaagaagctctacaaaaccaaactgctgcctctggaggaacattac
aagtttcacgagttccactctccagctctggaggatgcggattttgacaacaagcccatg
gtgctgctggtgggacagtactccaccggcaagaccagcttcatacgatacctgctggaa
caggacttcccaggcatgcgtattggtccggagcccaccacggactcgtttattgcagtg
atgcacggcgacatcgaaggccagatcccagggaacgctctggtcgtggatcccaaaaaa
ccttttcggaaactcaacgcatttggcaatgcgtttctcaacaggtttgtatgtgcccag
cttcccaaccctgttctggagagcatcagcatcattgacacaccaggaatcctgtctgga
gagaagcaaagaattagcagaggctacgactttgccgctgtgctggagtggttcgccgag
cgcgtcgaccgcattattcttctgttcgacgcccacaagctggacatctcggacgagttc
tcggaggtcatcaaagccttgaagaatcacgaggacaagattcgtgtggtgctcaacaag
gcggaccagatcgagactcagcagctgatgcgtgtctatggcgcccttatgtggtctctg
ggaaagatcgttaacacgcctgaggtgatccgcgtctacattggctcgttctggtctcac
ccgctgctcatccctgacaatcgcaagctgttcgaggctgaggagcaggacctgttcaag
gacattcagtctcttccacgcaacgctgctttacgcaaactcaacgatctcatcaagagg
gccagacttgctaaggtccatgcctacattatcagctccttgaaaaaagaaatgccctcg
gtctttgggaaagacaacaaaaagaaggaactgatcaacagcctgggagagatctacagc
cggatagagaaagagcatcagatttcacctggagactttcccaatctcaaaagaatgcag
gagcagcttcaatcccacgacctgaacaagtttcaggtgctgaagccgaagcttctggat
gccgtggacgacatgctggcgcacgacatcgcccagctgatggtcctggtgcgccaagag
gaaacacaaaagcccggtcaggtggtaaagggtggagccttcgaaggcaccatgaacggg
ccgtttggtcacgggtacggcgaaggcgccggtgagggaatcgacgagctcgagtgggtg
gtggcgcgcgacaagccaacgtacgacgagatcttttacacactctcgcccgtcaacggc
aaggtgaccggcgccaacgcaaagaaagagatggtgaagtcgaagctgccgaacacggtc
ctgggcaagatatggaagctggctgacattgataaggatggcatgctggacgacgaggag
tttgccctggccaaccatctcatcaaggtcaaactggaagggcacgagcttcccagtgag
cttccatctcatttggttcctccgtctaagagaaaattaccggagtaa
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