Silurus meridionalis (southern catfish): 124401326
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Entry
124401326 CDS
T08004
Symbol
dcn
Name
(RefSeq) decorin
KO
K04660
decorin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04350
TGF-beta signaling pathway
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124401326 (dcn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124401326 (dcn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
smeo00535
]
124401326 (dcn)
Proteoglycans [BR:
smeo00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
124401326 (dcn)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_5
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
124401326
NCBI-ProteinID:
XP_046729479
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All DBs
Position
18:complement(4977930..4997344)
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AA seq
363 aa
AA seq
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MRLACLTLLLVSMCWSLPFRQSGFLDFMMEDEAPSGDGAITPIEPVPPREPEGPVCPFRC
QCHLRVVQCSDLGLKNVPEDIPSDAHLLDLQNNKITEIRENDFKGLKGLHALILVNNKIT
IIHAKAFAPLVNLQRLYLSKNMLKDIPNNMPKSVQELRIHENQITKIKKASFTGMVNVIV
MELGSNPLTSSGVDADAFKDLKRVSYIRIADTNITSIPKGLPTALSELHLDGNKITKVTA
DSLKGLKHLAKLGLSNNEISVVENGTMGMMPHLRELHLDHNVLTSVPAGFPEHKYIQVIY
LHSNKIASVGTEDFCPPSFNTKKAMYSGISLFSNPVPYWEVQPITFRCVFDRSAVQLGNY
RKK
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaggttggcctgtcttaccctgctcctggtgtccatgtgctggtctctgcccttccgt
cagtctgggtttttggacttcatgatggaggatgaggcaccttcaggtgatggggcaatt
acacctatagagccggttccacctagagaacctgagggaccagtttgtcccttcagatgc
cagtgccatctgcgtgtggtgcagtgctctgatttagggttgaaaaatgttccagaggat
atcccatcagacgcccatctgctggacctacaaaacaacaagatcactgagatcagagag
aacgacttcaaaggcctcaaaggactccatgccctcatcctggtaaacaacaagatcact
atcatccatgccaaggccttcgctcctctggtcaacctccagaggctttacttgtccaag
aacatgctaaaggacattcccaacaacatgcccaagagcgtccaggagctgcgcatccac
gagaaccagatcaccaaaattaagaaggcctctttcactggcatggtcaatgtcattgtc
atggagcttggctccaaccccttgaccagttctggtgtggacgcagatgctttcaaagat
ttgaaaagggtttcctacatccgtatcgctgacaccaacattaccagcattcccaaagga
ctgcccactgctctgtcagagcttcacctggatgggaacaagattaccaaagtcactgct
gacagcctgaaaggtctcaaacacctggctaagcttggcctgagcaataatgagatcagt
gttgtggagaacgggactatgggcatgatgccacacttgagggagctccacctggaccac
aacgttctaaccagtgtgcctgctggttttcctgagcacaagtacatccaggtgatctac
ctccattccaacaagatagccagtgtaggaacggaagacttctgccctcccagcttcaac
actaagaaggccatgtattccggcatcagtctattcagcaaccctgtgccgtactgggag
gtccaacccatcaccttccgttgtgtttttgaccgctctgctgttcagctgggcaactac
agaaagaaatag
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