Silurus meridionalis (southern catfish): 124401360
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Entry
124401360 CDS
T08004
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124401360 (med23)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
124401360 (med23)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
124401360
NCBI-ProteinID:
XP_046729572
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All DBs
Position
18:26445026..26471857
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AA seq
1385 aa
AA seq
DB search
MMAVPMETQLQSIFEDVVKTEVIEEAFAGMFMDTPEDERTKLISCLGAFREYWGSLPQES
HEQCVLWIVRFVHNQHSPKRISFLYDCLAMAVETSLLPPRMVCQALIGSECLEWERTQLW
SLTFKLIRKIIGGVDYKGVRDLLKAVLDKTQTIPNLVSSAVVQQLLPAREVVEYILDRNA
CLLPAYFAVTEIRKLYPEGQLSHWLLGSLISDFVDSFRPTARINSICGRCSLLPVVNNSG
AICNSWKLDPATLRFPLRGMLPYDKDLFEPQTGLLRYVLEQPYSRDMVCNMLGLNKQTLN
IAQHKQRCPVLEEQLVDLVVYAMERSETEEQFDDGGTSQLLWQHLSSQLIFFVLFQFASF
PHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECI
PVPDINKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRIKSLPM
TDYKIALLCNAYSTNSECFTLPMGVLVETIYGNGTVRITLPGTNCMASCSTTPLPMNLLD
SLTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIESLGIKGFISQLL
PNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTA
LRLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHITDFFTGSDSIQG
TWCKEILQTIMNFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKS
MTNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGFRVLERIGARALVAHVRTFADF
LVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL
LLKPNDFRNRVSDFVKENAPEHWLQSDWHTKHMSYHKKYPEKLYFEGLAEQVNPPMQLQP
QYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTL
HYYERHLRERTNLKRKLVHAIMSSLKDNRTPGWCLSETYLKFGMNPREENVWVPDDTYYC
RLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGIDVGNALLNV
VLKSQPLVPRENVTAWMNAIGLIITALPEPYWIVLHDRIVSVISSPALTSETEWVGYPFQ
LLDFTACHQSYSEMYCSYVLALAHAVWHHSSIGQLSLIPKFLSEVLKPLVKTEFQLLYIY
HLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDHQSKHLAYMDPICDFLYHIKYMFTGDS
VKDQVEKIICTLRPAMKLRLRFITHTSKMDPATAVVTTASQPSTVSSPVPQTGPGPSNIP
LSVPQ
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggttccgatggaaactcagctccagagcattttcgaggacgtggtgaagacg
gaagtcatcgaggaagcgtttgcggggatgttcatggacacgcctgaggacgagcgcact
aaactcatcagctgtttaggagccttccgggagtactggggttccctccctcaggagtct
catgagcagtgtgtgctgtggattgtgcgtttcgtacacaaccagcacagccccaaacgc
atctccttcctctacgactgcctcgccatggctgtggagaccagcctgctgccacccagg
atggtgtgtcaggcgctgatcggctctgaatgtctggaatgggaacgcactcagctctgg
tctctgaccttcaaactgatccgaaagataattggcggtgtggattataagggtgtgagg
gacctgctgaaggctgtgctggataaaacacagaccatcccgaacctggtgagctcggcg
gtggtgcagcagctcctcccagcgcgagaggtggtggagtatatcttggacaggaacgcg
tgtctcctgcctgcttatttcgccgtgacggagatccggaagctttacccagagggtcag
ctctcacactggctgttaggcagcctgatctccgacttcgtggacagcttccggcccacc
gccaggatcaactctatttgtggtcgttgtagtctcctgcccgtggtgaataactcagga
gccatctgtaactcgtggaagctcgaccctgcgactctgcgcttccctctcagaggcatg
ctgccctacgataaggacctgtttgagccgcagacgggtctgctgaggtacgtgttggag
cagccgtactccagagacatggtgtgcaacatgctgggactcaacaaacagaccctgaac
attgctcagcacaagcagcggtgccctgtgctggaggagcagcttgtcgacctggtggta
tatgccatggagcgctcggagaccgaggagcagttcgacgacggcggcaccagccagctg
ctgtggcaacatctgtccagtcaactcatcttctttgtcctgttccagttcgccagcttc
cctcacatggtgctttcactgcatcagaagctggccgggcgtggtctgatcaaaggcaga
gaccacctgatgtgggtgctgctgcagttcatatcgggaagcatccagaagaacgcactg
gccgacttcctccccgtcatgaagctgttcgatctcctttaccctgagaaagagtgtatc
ccagtaccagacatcaacaagccgcagtccacacacgccttcgccatgacctgcatctgg
atccacctgaaccgcaaagctcagaacgacaactccaaactgcagatccccatcccccac
tcgctcaaactccaccacgagtttctgcagcagagtttgcgtattaagagcttacccatg
acggattataaaatagccctgctgtgtaacgcgtactccactaactcagagtgcttcacg
ctgcccatgggggtcctggtggagaccatctacggtaacggcactgtgcgcatcacgctc
cccgggaccaactgcatggcctcgtgctccaccacgccgctgcccatgaacctgctcgac
tcgctcaccgtccatgccaagatgagtctgatccacagtatagccacccgggtcataaag
ctggcccatgccaagtccagcatcgccctcgccccggcgctggtggagacgtacagccgc
ctgctggtctacatggaaatcgagtcgctcggcatcaaaggcttcatcagccagctcttg
ccgaatgtgtttaagtcacacgcatgggggattctccacacactgctggagatgttcagt
tacaggatgcaccacatccagcctcattaccgcgttcagctcctctcacacctccactcg
ctcgctgccgtgccacagaccaaccagaaccagctgcacctctgtgtggaaagtacagct
ctgcggttaattacagcgttgggaagctctgaggtgcagccacagttcacacgcttcctc
agtgaccccaagacggttctgtcggccgagtcggaggagctgaaccgagcgctcatcctc
accctcgcccgtgccacacacatcactgatttcttcaccggttcagactcaatccaggga
acgtggtgtaaggagattctacagaccatcatgaacttcacacctcacaactgggcctca
cacacactcagctgcttccctgctcctctgcaggcgttcttcaagcagaacaacgttccc
caagagagccgcttcaacctgaagaagaatgtcgaggaggagtacaggaagtggaagtcc
atgaccaacgagaacgacatcatcacccacttctccatgcagggttctccgccgcttttc
ctctgcctgctctggaagatgcttctagaaaccgaccacatcaaccagatcggcttcagg
gtcctggagagaattggggctcgagctctcgtcgctcacgtccggacgtttgccgatttc
ttggtgtacgagttttccacgtcggcaggcggtcagcagctgaacaagtgcattgagatc
ctgaacgacatggtgtggaagtacaacatagtcactctggatcgtttgatcctctgcctg
gcgatgagaagtcacgagggcaatgaggctcaagtgtgttacttcatcatccagctgctt
ctcctcaaacccaatgacttccgcaaccgcgtcagcgactttgtcaaagagaatgctccg
gaacactggctacagagcgactggcacaccaaacacatgtcctaccacaagaaataccca
gagaaactgtactttgaaggtctggcggagcaggtaaaccctcccatgcagctccagccg
cagtacctgcctatctactttggcaacgtttgtttgcgcttcttgcctgtctttgacatc
gtcatccaccgcttcctggagctcctgccagtctccaagtccttggaaacccttttggac
cacttgggcggattatacaagtttcatgatcgtccagtgacgtacctctacaacaccctg
cactactacgaaaggcacctccgagagcgcaccaacctcaaacgcaagcttgttcacgcc
atcatgagctcgctaaaagataaccgcactcccgggtggtgcctcagcgagacctacctg
aagtttggcatgaacccccgcgaggagaacgtctgggtccctgatgacacctactactgc
agactcatcgggagactcgtggacacgatggcaggaaaatctccaggtcctttcccgaac
tgcgactggcggtttaacgagttcccgaacccagcagcacacgcacttcacgtgacctgt
gtggagctgatggccctcgccgtgccggggatagatgtggggaacgcactgctgaatgta
gttcttaagagtcagccacttgttccccgggagaacgtgactgcttggatgaacgccatt
ggcctgatcatcaccgctctacctgagccgtactggatcgtacttcacgaccgcattgtc
agcgtgattagcagccctgcgctgacatcggagaccgagtgggtcggttatcccttccag
ctgctggacttcacggcgtgccaccagtcgtactcggagatgtactgcagctacgtgtta
gcgttagcacatgccgtgtggcaccactccagcatcgggcaactttcccttattcccaag
ttcctgtccgaggtcttgaagccgctggtgaagaccgagtttcagctgctctacatctat
cacctggtcggacctttcctgcagcgctttcagcaggagaggacacgctgcatgctcgag
atcggggtggcgttttatgagatgctgcaggcggtggatcaccagagcaagcacctggcg
tacatggaccctatctgtgacttcctgtaccacatcaagtacatgttcaccggagacagt
gtcaaagaccaggtcgagaagatcatctgcacgttgaggccggccatgaagctccgcctc
cgcttcatcacacacactagcaagatggatccagccacggccgtcgtcacaaccgcttcc
cagcccagcacggtgtcctctcctgtcccccaaactggacccgggccttctaatattcct
ctctcggttccccagtga
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