Silurus meridionalis (southern catfish): 124401389
Help
Entry
124401389 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 16-like
Organism
smeo
Silurus meridionalis (southern catfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-RING_10
zf-RING_5
EAP30
Fib_alpha
U-box
Glyco_hydro_18
DUF4407
DUF745
Motif
Other DBs
NCBI-GeneID:
124401389
NCBI-ProteinID:
XP_046729634
LinkDB
All DBs
Position
18:complement(25240846..25245717)
Genome browser
AA seq
569 aa
AA seq
DB search
MCRKMAEASISVDQDQFICPVCLDLLNDPVTIHCGHSFCKVCINGHWDEEYRKGVYSCPQ
CRDSFPSRPDLRXNNMLAEVVEKLKKFEVQSSALDHCNTGPGDVECDFCTGRKHKAIKSC
LMCLASFCEIHLKPHLDVPCLTKHTLIEASVKLQEKICSKHDKLIEIYCRTDQTCICYLC
TMDEHKGHDTITALAGKAEKQTELKEEQMKFQQRIQEKQKKVQELKQAVNIIKLSAQTAV
DDSEKIFTEMISSMEKKRSEVTELIRDQERAELSRAERLLEQQEQKISDLQRRITELEQL
SHTHDHIHFLQSFSRESCTFSAGVRSPPSKKKDFRTSSIPVHQQLSFDGVKNYVSDLKKR
LEEFCAGEFHKILPHDNSFLSEPQSRDEFLNYFCYLTLDHNTAHRYLILSEKNRAVSYSE
SLHQYSNHPERFDSCIQILSIESMCGRCYWEVEWSGVGFGGVSISVSYKDISRKGWGDKC
VFGRNDQSWSLWCYSSSLCFYHNNIKTDLGVPSPSRIGVYVDQSAGTLSFYSVSDMMKLL
YKVHTTFTQPLYAGFGFGALSNVRLCDPK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaggaaaatggctgaggccagtatttcagtagatcaagaccagttcatctgtcca
gtgtgtctggatctcctaaatgatccagtgactatccactgtggacacagtttttgtaag
gtgtgtattaatggtcattgggatgaagagtatcggaagggcgtctacagctgtcctcaa
tgcagagattctttcccttcaagacctgatctacgtnaaaacaacatgctggctgaagtg
gtggagaaactgaagaagtttgaagtgcaatcctctgctcttgatcactgtaacactgga
cctggagatgtggagtgtgatttctgcactgggagaaaacacaaagccatcaagtcctgt
ctgatgtgtctggcttcattctgtgaaattcatctgaaacctcatctagatgtcccttgc
ttaacgaaacacacattaattgaagcctcagtaaaactacaagaaaagatctgttccaaa
catgacaagctgattgagatctattgccgtaccgatcaaacctgcatctgttatttgtgt
acaatggatgaacataaaggacatgacaccatcacagccttagctggaaaagctgagaaa
cagactgagctgaaggaggagcagatgaaattccagcaaagaattcaggagaagcagaag
aaggtgcaggagctgaaacaggctgtgaacattataaagctcagtgcacagacagcagta
gatgacagtgagaagatctttactgagatgatcagctccatggagaaaaagcgctcggag
gtgacggagctgatcagagatcaggaaagggctgaactgagtcgagctgagcgactcctg
gagcaacaggagcagaaaatttctgatcttcagaggagaatcactgagctggagcagctt
tcacacacacacgatcacatccatttcctccagagtttctccagagagtcttgcaccttc
tcagctggtgttcggtctcctccatctaaaaaaaaggattttcgcacatccagcatccct
gtccatcaacagctctcatttgatggggtgaaaaattatgtctctgatctgaaaaagaga
cttgaggaattctgtgcgggggaattccacaaaatccttccacatgataattcttttctc
tcagagccacagagcagagatgaatttctgaattatttctgttatctgactctggatcac
aacacggcgcatcgttacctcattctgtctgagaagaacagagcagtgagctacagtgag
agtctgcatcaatactctaatcatccagagagatttgactcctgcattcagatattgagt
atagagagtatgtgtggacgttgttactgggaggtggagtggagcggtgttggctttgga
ggtgtgtccatatcagtctcatataaagacatcagcagaaaaggatggggtgataagtgt
gtgtttggacgcaacgatcaatcctggagtctgtggtgttattcttcttcgctctgtttt
tatcacaacaacattaagactgatctcggtgttccatcaccctcaagaataggagtgtat
gtggatcagagtgcaggaactctgtccttctacagcgtctctgatatgatgaagctcctc
tacaaagtccacaccactttcacccagcctctatacgctggatttggatttggtgctcta
tcaaatgtgaggttatgtgatccaaaataa
DBGET
integrated database retrieval system
