Silurus meridionalis (southern catfish): 124401503
Help
Entry
124401503 CDS
T08004
Symbol
vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124401503 (vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124401503 (vti1b)
Membrane trafficking [BR:
smeo04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
124401503 (vti1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Fusion_gly
DUF5783
HSCB_C
Motif
Other DBs
NCBI-GeneID:
124401503
NCBI-ProteinID:
XP_046729834
LinkDB
All DBs
Position
2:complement(27893309..27896962)
Genome browser
AA seq
249 aa
AA seq
DB search
MSVKSLTDRFRTHYRVYVIKMSRMSSEAFEKLHEMYRSQCDELKQLSDRVIRSQGEEKKK
LTRVFDERHREAQELLREMEQELISAPSSFRNSMSSKVRLYHRDLGKLQRQVHTSDTTYS
FSSRTGDGGHGIYGAQNEHSTEQQAQRTLLIQGTESLNNATQSIARSQRIAVESEQIGTD
IIEELGQQREQLDHTRDRLVHTGENLSRSRKILRTMSRRLMTNKLLLGIIIIMEVAILGA
VVYLKFFRH
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtaaaaagtttaactgatcggtttcggacacattatagagtttacgtgattaaa
atgagcagaatgtcgtccgaggcgtttgagaagcttcatgaaatgtaccgatctcagtgt
gatgagctaaagcagctctctgaccgagtgattcgctcacaaggcgaagagaagaagaag
ctgacacgagtgtttgatgagcgtcatagagaggcacaggagttgctgcgggagatggag
caggagcttatcagcgccccttcctcattcaggaactccatgtcctctaaagtgcggctg
taccacagagacctggggaagctgcagcgccaagtacacacctcggataccacatacagc
ttctcctctaggacgggagatggtgggcatggcatctatggcgctcaaaacgaacacagc
accgagcagcaagctcagcgaactttactgatccagggcactgagtctctgaacaacgcc
acacagagcatcgcacgcagccaacgcatcgctgtggagagcgaacagatcggcacggac
atcatcgaggagcttggacagcagagagagcagctcgaccacactcgagacaggctggtt
cacactggagaaaatctgagccgcagcaggaagatcttacgcaccatgtctcgcagattg
atgactaacaagctgttactggggatcatcatcatcatggaggtggccattctgggagct
gtggtctacctcaagttctttcgccactga
DBGET
integrated database retrieval system
