Silurus meridionalis (southern catfish): 124401513
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Entry
124401513 CDS
T08004
Symbol
casp8ap2
Name
(RefSeq) CASP8-associated protein 2
KO
K25593
CASP8-associated protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124401513 (casp8ap2)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
124401513 (casp8ap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
124401513
NCBI-ProteinID:
XP_046729850
LinkDB
All DBs
Position
18:complement(22240949..22250917)
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AA seq
1825 aa
AA seq
DB search
METSAIDELYGDLDQGIHDSVLDYNEDSVDIYSGLEDSPKRHINHGTTTTTTTTFLSPHR
VKESLDLYEELLTEEQKEKDSTYNEMKSKFVAAQNQVQDLLAKLQQVQTKNLSLHQENTL
LKKNICALIKTAKMEIVRKDEEISKLSRRTIRGNFHQSAKERGQAAYSRSAPVSGGESQE
SPGFTKGSLASVDATPSSFSVFRRCQVENSLNLQNNHSQSSDSLPDAGTQDQRRAPGDQT
CCTRDRESPSTHSESSTGQNVCEETDMRKEAQGKEIASKRMEVSEKHQTRPEREQREPSK
SSCGSGSSQRQQQDDPVTLRMSGRSKSPSSRALTDTQGRKEESRHKQGPEKARGSAEALG
RRSEKGSSHRKTEKRGTREHHRKEERRQEGISSSESRRTRNDGIKERRKSPQSEERKRPD
GKSSNGEERRSTRAEGSKENDRQGAKDAISVRDSCRSGDGPKDRSRSDVRESRRHSLPVK
PHHLRKDQDDKRSGRTEEPMSRSKSSSSRDNSRGDTYTSSAKERSDKNKRTGTSSMSAPD
KARIHKRSQGDKVQAEGRAKRISPIRLTSSCDDENAALPEESSPKRKLSFMETLNLTVSP
VKKQNTSERAEEPPHPEETLISNSTKDGNPFEVGEEFCVIDEVADDSVEGSFALPTNTTT
QPYDDEPPTCMEVKGQELDLPKMFDGDHSKTQAGKMDVSDSEMQETIHTTSISQEGVVDK
IAVPEDPLLPERATSVDLLSTLSLTDVSCKEQDPQASVKNFSAAGQIDDKPEKPSLPNDP
SQQEVATSVMPTPTIRTCSEMDTSVSLEVVSSIVGIDNQQSKETLPDSDREITPGLKNLT
PSPGSLILPSIEEDNMKPHEAGIPTRPASSSEPDSIENEIELSKTCKHLVVPHDEDSMML
TLSNLKVIPEAISPLTSPVRQIKKSQQQQRLGKEPHVKSLGKDFSTSATVGDKEAVKMDM
NKENKRPDSLVKLSVKTDQQDDLSTTATEEDLEEGEIISESDGEGTLVIQSPQNEKRSSL
RNQTSPRSQRLQNKSQTRAAVTPTRKEKEKNVPPKDSPSSNKRRFKTVTVPPKARISTAT
EFMNMLSFIRSELRRKYMKLHKNVAKPAFCCIIEMSQASFTEFVDSVNFHKFCSQGNEIK
PRLNKIITSVTSKVSSNGIVNRIFEQRAEDLKQKLWNFVDGQFDFLFKELKAALKGAPDL
FKNKSSSESKQPSAKEDLNVDLCKIQCKEPLSTTENRPQKMSTGEIESECQNVQEKISPS
NSLPSRSRGLGSSGKNIKATMEEGAKVPEVPNPSSNQSNPLQSGSFSEKSHNESVPVHEN
KTTIPAPSYTRRLSHSGSIQDRADFEILTEQQTSSLTFNLVTDSQMGDIFRCLLQGSDLM
EAGDNQNWPLNTPRKEGQAGESLVGLMTPSKMITPSKLITAWTSISPYKFQMPLNPALLD
ENCMLEVPTNALPNHSALPASTATSQHSFSILAEDLAVSLTIPSPLKSDGHLSFLQPMSG
QALTTPSNIISAHYSEDALLDGEDATEQDIHLSLETDNSSSPSGGSGNWEATTQPAFHFK
PNMPMQAEVMEKSNDHFIVRIRHTSPRVQEHTEMEPTEMGHTETLPDAEASSLLTFAQSV
PLAVQPHTIANEVSEAEISREFTSHVVPRECSPISVPKTTENLIEQSANDADASGFTATT
ELEPEVKEASNRGSKKRKKHHSGPKAKRSKREKSQDRQDKQRHKKRSKSSKEKIETTPLK
RVKTPSPQLSPNSLSAKNVIRKKGEVVVTWSREEDRDILVALKTKGASSKTFAALSSKLG
KSQAQIEERFTQLMKLFKKKEKMES
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atggagacgagcgccatcgatgagctgtatggcgatctggatcagggcatccatgattct
gtcctggattataatgaagactcggtggatatttactcgggactcgaggacagtcccaag
agacacataaaccatggcaccaccaccaccaccaccaccaccttcctttcacctcacaga
gtgaaggagtctctggatttgtatgaggaactcctgactgaagagcaaaaggaaaaagac
tcgacctataatgagatgaaaagcaaatttgtggcggcgcaaaaccaggtgcaggatttg
ctcgcgaagctgcagcaggtccagacgaagaacttgagtttacaccaggagaacaccctg
ctgaagaaaaacatatgcgcccttatcaaaaccgcgaagatggagatcgttaggaaggac
gaagagataagcaaattaagccgaagaacaatccgagggaatttccatcagtccgcaaag
gaacgaggacaagccgcttacagcaggagcgcccctgtatccggaggggagtctcaagag
tctccgggattcaccaaggggagtttggcatctgtagatgccacgccatcatcgttttca
gtgtttcgaaggtgccaggttgagaattctttaaatttgcaaaataatcattcccaaagt
tcggattcgctccccgacgccggcacacaagatcaacggcgtgccccgggtgatcaaacg
tgttgcaccagagaccgtgaaagcccaagcacacactcagagtctagcactgggcagaat
gtttgtgaagaaacggatatgaggaaggaagcacagggtaaagaaattgcctcaaaacgg
atggaggtttcggaaaaacatcaaaccagaccagaaagagagcagagagagccttcaaaa
agcagttgtggctcaggcagcagtcagcgtcaacaacaggatgatccggtaacactccgg
atgtctgggcggtcgaagagtccttcctctagagcgctcacggacacgcaaggcaggaaa
gaagaatcgcggcataaacaagggcccgaaaaggctcgcggaagcgcagaggcgttgggc
agacggagcgaaaagggcagttcacaccgaaagacggaaaaacgaggaacgagggagcat
cacagaaaagaggagaggaggcaagagggtatcagcagctcagaaagtagacgcaccaga
aacgacgggataaaggagcgcaggaagtcacctcaaagcgaagaaaggaaaagaccagat
ggaaagagtagcaatggagaagaaagacgaagcacaagggctgagggtagcaaagaaaac
gatcgacaaggtgccaaagatgccatttctgtaagggactcctgtcgcagcggtgacgga
ccaaaagaccgaagccgttctgatgtacgtgaaagcaggcgccattctttgcctgtcaaa
cctcaccatctgagaaaagatcaagacgacaaaaggtctggcagaaccgaagagccaatg
tccaggagcaaatcatcgagcagtcgtgataattcacgaggtgatacctatacgagttct
gccaaggagaggagcgataaaaacaaacgaactgggacgtcatccatgagcgctccagat
aaagcaaggatccacaaaaggagtcagggcgataaggttcaagccgagggccgtgcaaaa
aggatatctccaataagattgaccagcagctgcgacgatgagaacgctgcccttccagag
gaaagcagtccgaagcgaaaattaagcttcatggaaactctgaacctcactgtctctcca
gttaaaaagcagaacacctcggaacgagctgaagagccgccacaccctgaggagaccctc
ataagcaactcaaccaaggacggaaatccgtttgaggttggtgaagagttctgtgtcatc
gatgaagtagcggatgactcggtggagggctcctttgcccttcctaccaatacaaccaca
cagccatatgatgatgaaccacccacatgcatggaagtcaaagggcaggaacttgactta
cccaaaatgtttgatggtgaccatagtaaaacccaagctgggaaaatggatgtttcagat
tcagagatgcaggaaaccatacacactactagcatttctcaggaaggtgtggtagataag
attgctgtacctgaagatcccttactccctgaaagagctacatcagttgaccttctgtcc
actttgtctttaactgacgttagctgcaaagagcaagatcctcaagcttctgtgaagaat
tttagtgccgcaggtcaaatagacgataaaccagagaaaccatcgcttccaaatgatcca
tctcaacaggaagttgccacctcagtcatgccaactcctacaattaggacttgctcagag
atggacacctctgtgtctttggaggttgtttctagcattgtcggtattgataaccagcaa
agcaaagaaacattacctgattcagacagggagatcacaccaggccttaagaacttgact
ccaagtccaggctcattaatactcccaagcattgaggaggacaacatgaaaccccatgaa
gcaggaataccaactagaccagcaagttcctctgaacctgattcaatagaaaacgagatt
gagctctccaagacttgcaagcatctagtggtgcctcatgatgaagattcaatgatgttg
accctgagcaaccttaaagtaatcccagaagcaatcagtcctcttacaagtccggtacgc
cagataaagaagtcccagcagcagcagcgcttgggaaaggagccccatgtcaagagtctc
ggtaaagatttctcaacctcagccacagtgggagataaggaagcagtaaagatggacatg
aacaaagaaaataaaagacctgattctttagtcaagcttagtgtgaaaacagatcagcaa
gatgatctttctactactgccactgaggaagacttagaagaaggggaaataatcagtgag
agcgatggggaaggcactctagtcattcagagtccccagaatgagaaaaggtcaagtttg
agaaaccagaccagtcccagatcacaaaggttgcaaaacaaatctcaaacgcgagctgct
gttactcctacccgcaaagagaaagagaaaaatgtgccccctaaagacagtccctcctcg
aacaagaggcgtttcaagacagtcaccgttccgcccaaggcgagaatttcgactgcgacc
gaatttatgaacatgttgtcgtttatacggtcagaattgagacgaaagtacatgaaactt
cataaaaatgtcgccaaaccagccttctgctgcatcattgaaatgtcccaggcctccttc
acggaattcgtcgacagcgttaactttcacaagttttgcagtcaaggtaacgaaatcaaa
cctcgactcaataagatcatcacgtctgtaacgagcaaggtctcgagcaacggcatcgtg
aaccgaatctttgagcagcgagctgaagacctaaagcagaagctgtggaactttgtagat
ggccagtttgacttcttgttcaaggaactaaaagcagcacttaaaggcgctccagatctt
ttcaagaacaaatcttcttcagaaagtaagcagccaagtgcaaaagaggatttgaatgtg
gatctgtgcaagatacagtgtaaagaaccgttaagcacgactgaaaaccgaccacaaaaa
atgtctacaggtgaaatagagagcgagtgccaaaatgtccaggagaagatcagtccttca
aatagtttgccatccagaagtagaggccttggtagcagtggtaaaaacataaaggcaacc
atggaggagggggccaaagtaccagaagtaccaaaccctagctctaaccagtctaatccg
cttcaatcaggttccttctctgagaaatctcacaatgaaagcgtacccgtgcatgaaaac
aaaacaaccatacctgccccaagctatacccgacgtctatctcacagcggatcgatccaa
gatagggcggactttgaaatcctgacagagcagcaaacgtcaagtttgacctttaatttg
gtaacggattcccaaatgggagatatattcagatgtcttttgcaaggatctgatctaatg
gaggctggtgataatcagaactggccacttaacactccacggaaagagggccaagcaggg
gaaagtctcgttggcctcatgacccccagcaagatgataacgccttcaaagctcatcacc
gcatggacatccatttcgccttacaagtttcaaatgccattaaatccagcactccttgat
gaaaactgcatgttggaagttccgactaatgctctaccaaaccactctgcccttcctgcg
tcaactgcgacgtcccagcattctttctcgattttagctgaagatttggccgtgtccctt
accatcccttcacccttgaagtctgatggccacttgagctttttgcaaccgatgagtgga
caggcgctgaccacgccaagcaacatcatcagcgcccattacagcgaggatgcgctcctt
gatggagaggatgccaccgaacaagacatccacttgtctctcgaaacggacaattccagc
agtccgtcaggtggcagtggaaattgggaggctacaacccaaccagcattccatttcaaa
ccaaacatgcccatgcaagccgaagtaatggagaagtccaatgaccactttatagttcgt
atcagacacacgtctcctagggtacaagagcacacggaaatggagcccacggaaatgggg
cacacggaaacgttgccggacgccgaggcatcatctttacttacatttgctcagagtgta
cccttggcagttcagccccacaccattgcaaacgaagtaagtgaagctgaaatatcgaga
gagttcacctcacacgtggtccctagagaatgcagtcccatcagcgttcctaaaaccacg
gagaacctgatcgaacaatctgctaatgatgccgatgcctccggattcacagccactaca
gaattggagcctgaggtaaaggaggcaagcaacagggggtccaagaaacgcaagaagcat
cattcagggccgaaagcgaaacgttcaaaaagagaaaaatcacaagaccgacaagacaaa
caaaggcacaaaaagaggtcaaaatcatcgaaggagaaaatcgagacgactcctttaaag
agggtcaagacgccgtctccccagttgtctcctaacagtctctcagctaagaatgtcatc
aggaaaaaaggggaagtggtggtgacctggtctagggaggaagaccgagatattctggtt
gcactcaaaaccaaaggggcctcctctaaaacatttgctgctctttcatctaagttagga
aagtcacaagcacagatcgaagagcggttcacccagctaatgaaactttttaagaagaaa
gagaaaatggagagctga
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