Silurus meridionalis (southern catfish): 124401624
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Entry
124401624 CDS
T08004
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X1
KO
K12327
caldesmon
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
124401624 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124401624 (cald1a)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
124401624 (cald1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
124401624
NCBI-ProteinID:
XP_046729993
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All DBs
Position
18:10383268..10434100
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AA seq
577 aa
AA seq
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MDDFEWRREQRKQKREEMRLEAERMAYRRTEEDEEEAARERRRRARQDRVRNKEGEEIPQ
PAESMGINSHSSTVTETVSGSELSKAGEGDDEEQALLERLAKREERRQRRMMEALDRQKQ
LESDDAPSYSTYSVESSSTTSYRAFNNQEEEELAHNSKEEEKEEVKEEVISLQEMVEEKP
HRSYMREQESTEEKTKIEDEDSTGQDAVHPSEKCEPLNEDLTDSTVISKQEVEGDAAEVD
EDVEEVEENEIEMEDEDAGRKSKQQNGGVYDDSKHKKVERTQSRGSVHSSEGPAAEEGDD
GEQTRLEAERKLEELKRRRDETENEEFERMKQKQQEAEAELEELKRKREERRKVLEEEER
LKKQEEAEKKAREEEEKRRMKEEIEKRRAEAAERRQKVEEEVDGEAKPFKCVSPRGSSLK
IGERAEFLNRSAQKSAVKTSLTPVVSKIDNRLEQYTTAVQSNKEVRTPRVAAIDLPVVSD
GVRNIKSMWEKGNVFSSGISTPSSNKDAAGIKVGVAGRINDWLNKTPETGKTPGGRPVDL
KPGDVSGKRNLWENKGSSATKVTSRGESKSVANGMGH
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggatgactttgaatggcgccgggagcagaggaaacaaaagagagaggagatgcggctg
gaagcagaaaggatggcctaccgccggactgaggaggacgaggaagaggcagctcgtgag
cgtcgacgaagagcacgccaagatcgtgtacgaaacaaggagggcgaggagatacctcag
ccagccgagagcatggggataaacagccacagttccacagtaacagaaactgtgtcaggc
tcagagctgagcaaggctggtgagggagatgatgaggagcaagccctgcttgagcgcctg
gccaagcgggaggagcgcaggcagaggaggatgatggaggcactggatagacagaaacag
cttgagtctgacgatgctccatcctacagcacctacagtgtggagagctcctctaccacc
tcttaccgagcattcaacaaccaggaggaggaggagctggcacacaacagcaaggaggag
gagaaagaggaggttaaggaggaggtcatctcactgcaggagatggtggaggagaagcca
cacaggtcttacatgagggagcaggaatccactgaggaaaaaactaaaatagaagatgag
gacagtactggtcaggatgctgtgcacccaagtgaaaaatgcgagcctttaaatgaagac
ctaactgattcaacagtcatttcaaagcaggaagtggagggggatgcagcagaagtcgat
gaggatgtagaggaagtagaggagaatgagatagagatggaggatgaggacgcagggagg
aagagcaagcagcagaacggtggagtgtatgatgacagcaagcacaaaaaggtggagaga
acccagagccgtggtagcgtgcactcttctgagggacctgcagcagaggaaggggacgac
ggggagcaaacacgcctggaggctgagaggaaactggaggagctgaagagaaggagagac
gagactgagaacgaggagtttgagaggatgaagcagaagcaacaggaggctgaggccgag
ctggaggagctaaagaggaagagggaggaaaggaggaaggtgcttgaggaagaagagagg
ctgaagaaacaggaggaggctgaaaagaaggcaagagaggaggaggagaaaaggagaatg
aaggaggagatagagaagagaagagcggaggcagctgaacggaggcaaaaggtcgaagag
gaggtagacggggaagccaaacccttcaagtgtgtgagcccgagaggatcctctctgaag
attggtgaaagggcagaattcctcaacaggtcagcgcagaagagtgccgtgaagacatct
ctcactcctgtggtgtcgaagattgataacagactggagcaatacaccacggctgtgcag
agtaataaagaggtgcgcacgccacgcgtggctgcaatcgacctgcctgtggtttctgat
ggcgtgcggaacattaagagcatgtgggagaagggcaacgttttcagttccggcatcagc
acaccctccagcaacaaggatgcagctggaataaaagtgggcgttgcaggccgtatcaac
gattggctgaataaaacaccagagacgggcaaaaccccaggagggagacctgtggacctg
aaacctggcgatgtttctggcaagcgcaatctatgggaaaacaaaggctcctctgctacc
aaggtgacaagcagaggagagagcaaatctgttgccaatggaatgggtcactaa
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