Silurus meridionalis (southern catfish): 124401638
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Entry
124401638 CDS
T08004
Symbol
pphln1
Name
(RefSeq) periphilin-1 isoform X1
KO
K21872
periphilin-1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124401638 (pphln1)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124401638 (pphln1)
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Gene cluster
GFIT
Motif
Pfam:
Periphilin_C
TraF
Motif
Other DBs
NCBI-GeneID:
124401638
NCBI-ProteinID:
XP_046730024
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Position
18:complement(20018740..20030762)
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AA seq
350 aa
AA seq
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MAFRRGRSIRDLYEQRFHPDRAAPYPRGGGERRNFGRPDEEYVRNFDCDSPRFYPNGGPR
NYHNEDKKGYHSESHYSASNDSRGGPANRRQDSYSYYRGPKDDGHSGHQVDFRGRSRASS
SPNARVQGSHPAPRSMSALGSNPGDDTLIQAIMNLDRGDERESLRRKAPFPPVHDCSPTR
QDVSPSHHSRSGSSISSRSYSPDRGKSHTYQPPLGKNRDRAPGPSVSVSRDGSPHSTVSA
SKEEMPAIERQVDEPLAPADEAITIADDFHERRSQAIAAKAREIEKVYRQDCETFGMVVK
MLVAKDPSLEKHLQSPLKENLSEIRERCLEDLRHFISELDEVVRQPEPSV
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttaggagagggaggagtatccgagacttgtacgagcagcgttttcatccagac
agagccgctccttacccaagaggaggaggagagaggagaaattttggacgtcctgatgaa
gaatacgtccgaaactttgactgcgactctccacgcttttacccgaacggtggtcccaga
aactaccacaatgaagacaaaaagggttaccatagcgaaagccactactccgcctctaat
gactccagaggaggtccagctaatcgaaggcaggatagctactcttattacagaggaccc
aaagacgatggtcactctggacaccaggtggatttcagaggccgcagtcgagcttcctct
tctcccaatgctcgtgtccagggctcgcaccctgctcccagatccatgtcggcactgggc
tccaacccaggagatgacaccttaatccaggccattatgaacttggatcgaggagatgag
agggaaagtctgcggcgtaaagcgccctttcctccagtccatgactgctctcctactcgg
caggacgtgtctccttcccaccacagtcgctccggatccagcattagcagccgaagctac
tctcctgaccggggaaagagccacacgtaccagcctccactgggaaaaaaccgggaccgg
gccccggggccctctgtcagcgtgtctcgagacggatctccacatagtaccgtgtcagct
tctaaagaggaaatgccagcgatagaacgccaagtagatgaacctctggctcctgcagat
gaagccattaccattgcagatgacttccatgaacgccgatctcaagctattgcagctaaa
gcccgggagattgagaaggtttaccgccaagactgtgagacatttgggatggtggtaaag
atgcttgtggccaaggacccaagtctggagaagcacctgcagagccctctgaaagaaaac
ctcagtgagattcgagaacgatgtcttgaggacctgcggcactttatctctgaattagat
gaggtcgtacgtcaaccggaaccttctgtctga
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