KEGG   Silurus meridionalis (southern catfish): 124401638
Entry
124401638         CDS       T08004                                 
Symbol
pphln1
Name
(RefSeq) periphilin-1 isoform X1
  KO
K21872  periphilin-1
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smeo03036]
    124401638 (pphln1)
Chromosome and associated proteins [BR:smeo03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    124401638 (pphln1)
SSDB
Motif
Pfam: Periphilin_C TraF
Other DBs
NCBI-GeneID: 124401638
NCBI-ProteinID: XP_046730024
LinkDB
Position
18:complement(20018740..20030762)
AA seq 350 aa
MAFRRGRSIRDLYEQRFHPDRAAPYPRGGGERRNFGRPDEEYVRNFDCDSPRFYPNGGPR
NYHNEDKKGYHSESHYSASNDSRGGPANRRQDSYSYYRGPKDDGHSGHQVDFRGRSRASS
SPNARVQGSHPAPRSMSALGSNPGDDTLIQAIMNLDRGDERESLRRKAPFPPVHDCSPTR
QDVSPSHHSRSGSSISSRSYSPDRGKSHTYQPPLGKNRDRAPGPSVSVSRDGSPHSTVSA
SKEEMPAIERQVDEPLAPADEAITIADDFHERRSQAIAAKAREIEKVYRQDCETFGMVVK
MLVAKDPSLEKHLQSPLKENLSEIRERCLEDLRHFISELDEVVRQPEPSV
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggcgtttaggagagggaggagtatccgagacttgtacgagcagcgttttcatccagac
agagccgctccttacccaagaggaggaggagagaggagaaattttggacgtcctgatgaa
gaatacgtccgaaactttgactgcgactctccacgcttttacccgaacggtggtcccaga
aactaccacaatgaagacaaaaagggttaccatagcgaaagccactactccgcctctaat
gactccagaggaggtccagctaatcgaaggcaggatagctactcttattacagaggaccc
aaagacgatggtcactctggacaccaggtggatttcagaggccgcagtcgagcttcctct
tctcccaatgctcgtgtccagggctcgcaccctgctcccagatccatgtcggcactgggc
tccaacccaggagatgacaccttaatccaggccattatgaacttggatcgaggagatgag
agggaaagtctgcggcgtaaagcgccctttcctccagtccatgactgctctcctactcgg
caggacgtgtctccttcccaccacagtcgctccggatccagcattagcagccgaagctac
tctcctgaccggggaaagagccacacgtaccagcctccactgggaaaaaaccgggaccgg
gccccggggccctctgtcagcgtgtctcgagacggatctccacatagtaccgtgtcagct
tctaaagaggaaatgccagcgatagaacgccaagtagatgaacctctggctcctgcagat
gaagccattaccattgcagatgacttccatgaacgccgatctcaagctattgcagctaaa
gcccgggagattgagaaggtttaccgccaagactgtgagacatttgggatggtggtaaag
atgcttgtggccaaggacccaagtctggagaagcacctgcagagccctctgaaagaaaac
ctcagtgagattcgagaacgatgtcttgaggacctgcggcactttatctctgaattagat
gaggtcgtacgtcaaccggaaccttctgtctga

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