Silurus meridionalis (southern catfish): 124401748
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Entry
124401748 CDS
T08004
Symbol
vegfab
Name
(RefSeq) vascular endothelial growth factor Ab isoform X1
KO
K05448
vascular endothelial growth factor A
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04020
Calcium signaling pathway
smeo04370
VEGF signaling pathway
smeo04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124401748 (vegfab)
04370 VEGF signaling pathway
124401748 (vegfab)
04020 Calcium signaling pathway
124401748 (vegfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124401748 (vegfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124401748 (vegfab)
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124401748 (vegfab)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Growth factors (RTK binding)
124401748 (vegfab)
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Heparan sulfate / Heparin
Growth factors/receptors
124401748 (vegfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
VEGF_C
SWAP1_C
Motif
Other DBs
NCBI-GeneID:
124401748
NCBI-ProteinID:
XP_046730135
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All DBs
Position
18:complement(18546602..18565868)
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AA seq
252 aa
AA seq
DB search
MSALLSETLSNAFEQVRRSYDGVLIRLSRCAMSVMNLAVRLLQLFCVTLLYFSAVKSAYI
PKENGGSAIEVVPFTEVYNKSMCRPREMLVEVHQEYPEDIEHIFIPSCVVLMRCAGCCND
EMLECAPTATRNITMEVQKLKPLRIKRNYPMSFAEHTECECRVKKDFQDKTEIEPRRGKG
KGQKGKRKKNRDKTRDFTHCKPCCVTCSERRKRLYVQDPETCQCTCKHSEADCKLRQLEL
NERTCKCDKPRR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccctgctatctgagactctctctaatgcgtttgaacaagtccgccgatcctac
gacggggttctgatcagactctcgcgctgcgccatgtccgtcatgaacttggccgtgcgc
ttgttgcaattgttttgcgtcacgctgctttatttctcagctgtcaagagtgcctatatc
cctaaagaaaatggaggcagcgcgattgaagtcgtgccatttaccgaggtctacaataag
tcgatgtgccggccacgggaaatgctcgtggaggtccatcaggagtatccagaagacatc
gagcacattttcattccgtcctgcgtggtgctcatgcgctgtgccggctgctgcaacgac
gagatgttggagtgcgcgcccaccgccacgcgcaacatcaccatggaggtacaaaaatta
aaacccctgcgcatcaagcgcaactacccaatgagttttgcagaacacactgaatgtgaa
tgcagagtaaagaaggacttccaggataagacagaaatagaacctcgccgaggcaagggg
aaaggtcaaaaggggaagcgaaagaaaaaccgtgacaaaacgcgggattttactcactgt
aaaccgtgctgcgtcacatgctccgagagaagaaagcggctctacgttcaggacccggaa
acgtgccagtgcacctgcaagcactcggaggccgactgcaagctaaggcagctcgaactg
aacgagagaacttgcaaatgtgacaaaccgaggagatga
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