Silurus meridionalis (southern catfish): 124401765
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Entry
124401765 CDS
T08004
Symbol
rbm17
Name
(RefSeq) splicing factor 45 isoform X1
KO
K12840
splicing factor 45
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124401765 (rbm17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124401765 (rbm17)
Spliceosome [BR:
smeo03041
]
Complex A
U2 snRNP components
U2 related factors
124401765 (rbm17)
Complex B
124401765 (rbm17)
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Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Nha1_C
SWAP1_C
Motif
Other DBs
NCBI-GeneID:
124401765
NCBI-ProteinID:
XP_046730157
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Position
18:complement(14951805..14963356)
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AA seq
418 aa
AA seq
DB search
MSLYDDLGVATSDAKTEGWSKNFKLLQSQLKVKKAALTQAKTQRMRQSNVLAPVIDLKRG
SSVDDRQISDTPPHTATGLKDPAPAAFSSSDVLIPLADEYDPMFPNDYEKVLKRQREERQ
RQREQERQKEIEEREKKRKERHEGGAPSGFSRFPAEAESDEEEEYEKEKRKRNMGGAAIA
PPSSLVEKDSTMYSNEDESRQRSKAAIPPPVFEDSERPRSPPGPTSSFLANMGGTVAHKI
MQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDSTEKSGVSSQNAADVPGFIPA
AAADAKKNDVNPLTEILKCPTKVVLLRNMVGRGEVDEDLEAETKEECEKYGKVIKCVIFE
ISDVSDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLGETV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtatgatgatttgggtgttgccaccagcgatgcaaaaactgaaggctggtcg
aagaacttcaaactgctgcagtcgcagcttaaagtgaagaaagcagccctgacacaggcc
aagacgcagagaatgcggcagtcaaatgtcctggctccagttatcgatctgaagcgggga
agcagtgtagatgacagacagatctcagacacgcctccacacacagcaacagggttaaag
gaccctgcacctgccgccttttcttcaagcgatgtcctgatcccgctcgctgacgagtac
gatcccatgttccccaacgactatgaaaaagtattaaaacggcagcgagaagagcggcag
aggcagagagagcaggagcggcagaaggagatagaggagagggagaagaagcgtaaagag
cgtcatgaaggaggagcaccaagcggtttctctcgcttccctgcagaggccgagtctgat
gaagaagaggagtatgagaaagagaagaggaagagaaatatgggaggagccgcaattgca
cctccatcatctctagtcgagaaggactcaacgatgtactcgaatgaagatgaaagtcgt
cagcgttccaaagcagcgatccctcctcctgtttttgaggactctgagagaccacgttcg
cctccgggacccaccagctctttcctggcaaacatgggggggactgtggctcacaagatt
atgcagaaatacggctttcgggaaggccagggcctgggcaagcatgaacaggggctgagt
accgctctgtcagtggaaaaaacaagcaaacggggtgggaagatcatcatcggagactcg
acagaaaagtctggagtatccagtcaaaatgcagctgatgtgcctggctttattccagca
gcagcagcagatgcgaagaagaatgatgtcaaccccctgactgagatcctcaagtgccct
acaaaggtggtgttattgcggaacatggtgggaagaggagaggtggatgaagacctagag
gctgaaactaaagaggagtgtgagaaatacggcaaagtcatcaagtgtgttatctttgag
atatcagatgtgtcagatgacgaagcggtgagaatattcctggaatttgagcgggtcgaa
tcggccattaaagccgtggtggatctgaacggaaggtattttggaggtcgagtggttaaa
gcctgcttctataacctggacaaatttcgtgtgttagacctgggagagacggtgtga
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