Silurus meridionalis (southern catfish): 124401777
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Entry
124401777 CDS
T08004
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124401777 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124401777 (nup50)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124401777 (nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
124401777
NCBI-ProteinID:
XP_046730188
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All DBs
Position
18:complement(11391587..11399795)
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AA seq
456 aa
AA seq
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MAKRIAEKELTDRNWDQEDEGEEAGTFSIASEEVMKNRAIKKAKRRNLGTEGESGGAFKS
FKGFCPAPAAAATFSVSGNGAGFKSISLTNGSAPSVTPTFGGFNSPDSAKTNTGTTSSNG
PASSSSSPLNSGDGIANGSAPSLPTISGGGSTSKEYNRQLTALNCSVRDWITKHVNDNPL
CDLNPIFRDYERHLATIESNYGIGAAAGAQQEKQANATRNTPSFSSSSNVTSAAPALFSF
TKNKDIVAPEKSSIPPGVSFNFGQKVDNSVLSSIKSAGASGFSFSPTSSSATSVFGAAST
SASTGTFSFNAAKTEAASKRQAEHSTDEESDEPPVPVVKEVKEKDAFYSKKCKLFYKKEN
EFKEKGVGTLHLKLVAEGKLQLLVRADTNLGNILLNIMVHSSMPCTRTGKNNVMVVCMPN
PPVDDKNPSTPVPMLIRVKTPEDADELHKLLQEKKA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcggattgctgaaaaagagctgacagaccgaaactgggatcaggaggatgaa
ggagaagaggcaggaacattttcaattgcaagtgaggaagtgatgaaaaaccgggctatt
aagaaagccaagcgtcgaaatcttggcacagagggagagagcggaggagcgtttaaaagc
tttaagggtttctgtccggccccagcggctgcagcaactttctccgtgtctgggaatggg
gctggatttaaatccatctctttgaccaatggcagtgctccatcagtcactccaacattt
ggcggttttaactcccctgacagtgccaagacgaacaccggcaccacatcatccaatggc
ccagcctcctcctcatcctcccccttaaacagtggtgacggcatagccaacggctccgcc
cccagcctgcccactatctctggaggaggcagtaccagtaaggagtacaaccggcagctt
acagctctcaactgctctgtgcgtgactggatcaccaagcacgtgaatgacaacccgctg
tgcgatctcaaccccatctttcgcgactatgagcggcacctggccaccattgagagcaac
tacggcattggcgcagcagcaggggcacagcaggagaaacaggcaaacgccaccagaaac
acaccatcgttctcttccagcagtaatgttacatcggctgctcctgcattgttctccttt
acgaagaacaaggacattgttgctcctgagaaaagctccattcctccaggagtttctttc
aactttggccagaaggtagacaactctgtgcttagctcaatcaagtctgcaggagcttcc
gggttttcgttttctcccacctcctcttctgccacgtctgtgtttggtgcagcaagcacc
agcgcttctacaggcaccttctctttcaatgcggccaagactgaagcagccagcaaacgc
caagcagagcacagcaccgatgaagaatcagatgagccgccagtaccggtagtaaaagaa
gtcaaggagaaagatgctttttactctaaaaagtgtaaactgttctataagaaggaaaac
gagtttaaagagaaaggagttggaacactgcatttaaaactggttgcagagggcaagctg
cagctcctagtgcgtgcggacacaaacctaggaaacatcctgttgaatatcatggttcac
tcctccatgccgtgcacacggacagggaaaaacaacgtcatggtggtctgcatgccaaat
ccccctgtggacgacaagaaccccagcactcctgtaccaatgctgatccgtgttaaaacg
ccagaggatgctgacgaactacacaaacttctgcaggagaagaaagcataa
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