Silurus meridionalis (southern catfish): 124401811
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Entry
124401811 CDS
T08004
Symbol
def6c
Name
(RefSeq) differentially expressed in FDCP 6 homolog isoform X1
KO
K20072
switch-associated protein 70
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124401811 (def6c)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Macropinocytosis
Others
124401811 (def6c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
PH_3
PH_11
PH_8
PH_20
Motif
Other DBs
NCBI-GeneID:
124401811
NCBI-ProteinID:
XP_046730258
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All DBs
Position
18:9318118..9326122
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AA seq
687 aa
AA seq
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MDLQSELLKSIWYAFTSLEAERSGKVSKSQLKVLSHNLYTALNIPHDPIALEEHFKDNDN
GPVSDHGYMPYLNKYILAKATEGTFNKETFDELCWMMTSKKNFKPSIPHGLCSQSDCFKL
FCLFNLLSEDRYPLVIIQPELEYLLKKISTAMNQEWDGTALEDLLSKDPSLQDGLTVWMF
LEHLSAGHLLRVDSKEAFSLALDDIFLEMYHNVLKKGYMLKKGHVRRNWQERWFVLKPGS
LAYYIIEDQKEKKGEVQLDGSCVLETMPDKEGKRCLFCVKTPGRTYEMSATDQKQRVEWI
QAMQTALRLKTEGKSSLHKELKLRRRELRENSQNSPRTECPSSQSGLRILSQSSENGQRS
LSQSSQSERSTEVEESSSGAHCEPGSKEPDLEIIDIIQQHLEMEVQRKKEDALEKEKQKE
RQQELERLVEEANKAREDMVALLAKMEREVKQQKVRIQELELTQQKLEEALNTQIQARLE
DEKVRHELERLLEEERRKLSDMILNQRQLEARDFAEIDQVKLPQPKKDEDCIHTSLSPVI
PLSSSSPSTSPTSTSSPSSNQILSTTPVFSETMEMHQANVEKMSEHFSKAPHMRQWNVQL
NRLMKPITPADKMERLSVRSHHPKHGQALTSTEFIVRYQSTVAETESSNSQFRKTEEDVG
TEEPITTSRVEEPPKTREQIEQKKDFA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggacctccaatctgagctgctgaagtctatctggtacgcgttcacatcactggaagcc
gagcgcagcggcaaagtgtccaaatcccagctgaaggtgttgtctcacaatttatacaca
gctctgaacatccctcatgaccctatagccttagaggagcatttcaaggataatgacaat
ggacccgtctctgatcatggctacatgccttatctcaacaagtacattctggcaaaggct
actgagggtacatttaacaaggagacgtttgatgagctgtgctggatgatgacatccaag
aagaacttcaagcccagtattccacacgggctgtgttcacaaagtgactgcttcaagctc
ttctgcctgtttaacctgctttctgaggaccgttatcctcttgttatcatccagcctgag
ttggagtacctgttgaagaagatctctactgctatgaaccaggagtgggatgggacggca
ctggaggatctgctatccaaggatccttctttgcaggatggcctgacagtgtggatgttt
ttggagcacctcagcgcagggcaccttctgagggtggacagtaaggaggccttcagcctg
gctctggatgacatcttcttagagatgtaccacaatgtactgaagaagggttacatgctg
aaaaaggggcatgtacgtaggaattggcaagagcgttggtttgtacttaagccaggcagc
ttggcctactacattattgaggaccagaaagaaaaaaagggagaagtccagttggatggg
agctgtgtgttagagaccatgccggataaagaaggaaagcgctgcttattttgcgtgaag
acccctggcaggacatatgagatgagtgctacagatcagaaacagagagtggagtggatt
caagctatgcagacagcactgcggctgaagacagaggggaagagctcattgcataaggag
ctaaagcttcgcagacgagagttacgggaaaacagccagaacagtccacgaactgagtgc
ccaagcagtcaaagtgggctgagaattctgagccaaagtagcgaaaatggacagagaagc
ctgagccagagtagccaaagtgaacgaagcactgaagtcgaggaatccagctctggagcc
cattgtgaaccagggagcaaggaaccagacctggagatcatagacattatccagcaacac
ctggaaatggaggtgcagcgcaaaaaggaagatgcattggagaaagagaagcagaaggag
aggcagcaagagctggagagactggtggaggaagcaaacaaggccagagaagacatggtg
gctttactagctaaaatggaaagggaggtgaagcaacaaaaagtgagaatacaggagctg
gaactcacacagcaaaaactggaggaggcactcaacacacaaattcaggctcgattagag
gatgagaaagtccgacatgagcttgagaggctactggaggaagaaaggaggaaactaagc
gatatgattctcaatcagagacagttggaggctcgtgattttgcagaaatagaccaggtg
aaattacctcagcctaaaaaagatgaggattgcatacacacttctttatcccctgtgatc
cctctgtcgtcaagcagtccttccacaagccctacatccacaagctctccatcctcaaac
caaatattgagtacaaccccagtcttttcagaaacaatggagatgcatcaggccaatgtg
gagaaaatgtccgagcatttttcgaaagcaccacatatgagacaatggaacgtccagctt
aaccgccttatgaagcccatcacaccagcagacaagatggagcgtctgtcggtgaggtcc
caccatcccaaacacggccaggcactcaccagcacagagttcattgttaggtaccagtca
accgtcgctgaaacagaatccagcaacagccagttccgaaaaactgaagaggatgtggga
acagaagaaccaataactacctctcgggttgaggaaccacctaaaacaagagaacaaatt
gagcagaaaaaagactttgcatag
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