Silurus meridionalis (southern catfish): 124401819
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Entry
124401819 CDS
T08004
Name
(RefSeq) protein bicaudal D homolog 1-like isoform X1
KO
K18739
protein bicaudal D
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124401819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124401819
04131 Membrane trafficking [BR:
smeo04131
]
124401819
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
124401819
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
124401819
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BicD
BICDL2_C
ApoO
DUF1759
Motif
Other DBs
NCBI-GeneID:
124401819
NCBI-ProteinID:
XP_046730264
LinkDB
All DBs
Position
18:16881822..16903670
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AA seq
1022 aa
AA seq
DB search
MAAGGGRDGTVDSEVERLTHELAEANREKVRAAECGLAVLEENQALKLQYAELEAEQETL
RRELEHLQEAFSQAYSTQRKVAEDGETNEEALLQESATKEAYYVSRLLNQQTELKHTRCQ
ASNTQAENERLGTILQEIRENNDMLDIQRSRLREEVREYKFREARLLQDYTELEEENITL
QKLVSTLKQNQVEYEGLKHEIKVLEEETVLLNSQLEDALRLKDISESQLEEALNALKSER
EQKNSLRKEIAHHLTLCDGPFSSASAHLMALSSAPPSGSATPTAATSPGSEDGGKCNGLL
LQGSAVKALGRLNGEFRGAGQRKQSDSTPDLFSELHLNEIQKLKQQLQQVEQEKTSALNC
LQECETQLRHTQCALNEQFERAKHLQQQVSTRHQHGSATETGDEDKVKAELKGSSWACDD
LEHLGLELLQCKYKLAVAEVVSLNGELKDLQERHKECVEQAARAEEHAQVRLKTLEAQVA
CLDCSCREKREKEAALQRELKKVSDSALEYHNILATAQEELTTFSEELAQLYHHVCLCNN
ETPNRVMLDYYRQGRTPPRAMSTSLKAQDDHRVLLTPRLARRLAAINAATSSTSTPSDSQ
SPTDSPSKDALNSDDSPVRTGVSSSAVSASSSSSSPAPDSPAGSDTRREPINLHPLNAII
RDQIKHLQKAVDCSLQLSRQRAAVRELAPLFDKEKEACMEEILKLKSLLSTKREQIATLR
LVLKANKQTAEMALSNLKSKYETEKNMVTETMMKLRNELKALKEDAATFSSLRAMFATRC
DEYLTQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEDLEFDHEQSYRPRMGKL
SKLRTTPKVSGTVTLPLPDTSSTVAEAIAETSALSSPIVATPLLCSDPGSPPSLEAPSSP
ASSFSSSWTPPVTPYSRGHTHWTVGMRANMVEPHSHVVNVSRPTSLTPCYAVESRYSSGS
LPPSPYRSPILGSYRSTWSSPRSRPLSTVLTHPTHTTRYTSPTFSSYGQSYARNYTSQHP
RY
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgggcggagggcgcgatggaacggtggactccgaagtcgagcgcctcacccac
gagctcgccgaagcaaaccgggagaaggtccgcgccgctgaatgcggactcgcggtgctg
gaggagaaccaagccctaaagctgcagtacgctgaactcgaagccgagcaggagaccctg
agacgggagctggaacatctacaagaggcctttagccaggcatactctacccagaggaaa
gtcgcagaggatggtgagaccaacgaggaagcactccttcaggagtcggccaccaaggag
gcgtattacgtaagccgtctgctgaatcagcagactgaactgaagcacactcgctgtcag
gcctccaacacacaggcagagaatgaacgacttggcaccatcttgcaggaaattcgagag
aacaatgacatgctggatatacagaggagcaggttgagagaagaagtgagagagtataag
ttccgagaggctcggctgctccaggactacaccgagctggaggaggagaacatcacactc
caaaaattagtgtcaacactcaaacagaaccaggtggagtatgaaggcctaaaacatgag
attaaggtcttggaggaggagacagtcttgctgaatagccagttagaggatgcattgcgc
ctgaaggatatctcggagagtcaactggaggaggcacttaatgctctgaagagtgaacgt
gagcaaaagaacagcctgcgtaaggagatagcacatcacctcaccctgtgtgacggaccg
ttctcttcagccagtgcccatttgatggccctcagttcagcacctccaagtggcagtgcc
acgcctactgctgccacttctccaggcagcgaggatggtggaaaatgcaatggacttctg
ctacagggttcagctgttaaagcactgggtcgactaaatggggagtttagaggagcaggt
cagagaaaacagagcgactccactcctgacctctttagtgagcttcacctcaatgagatt
cagaaactcaaacaacaactgcagcaggtggagcaggagaaaacatctgcactgaattgc
cttcaggagtgtgagacacagctacgacacactcagtgtgctctaaatgaacaatttgag
agggcaaagcacctccaacagcaagttagtacacgacaccagcacggaagtgccacggaa
actggcgatgaggacaaggtgaaggcagagctaaaaggctcatcatgggcttgtgatgac
ctagagcacctgggcctggaactattgcagtgtaagtacaaattagcagtggcagaggta
gtaagtcttaatggtgagctgaaggatcttcaggagaggcataaagaatgtgtggagcag
gcagcacgggcagaggaacatgcccaggttcgactaaagactcttgaagcacaggtggct
tgcctggattgcagctgtcgtgagaaaagagagaaggaagcagcacttcagcgggaacta
aagaaagttagtgattctgcattggaataccacaacatcctggctacagcccaagaggag
ctgaccaccttcagcgaggaactggcacagctttaccatcatgtctgcttgtgcaacaat
gaaacaccaaatcgcgtaatgctggattattaccgccagggccgaactccgccacgtgct
atgtccacaagtcttaaagcacaagatgaccatcgggtcctcttgacgccaaggttggca
cgtcgcttggcagctatcaatgctgccacatcttccacctcaactccaagtgactcacag
agcccgacagactcgccctccaaagatgccctcaattcagatgacagcccagtgcgcaca
ggtgtgagctcctctgctgtcagtgcctcatcatcatcatcatccccagcacctgattcg
cctgcaggctcagacacacggcgggagccgattaacctccaccccctgaatgctattata
cgagatcaaatcaagcatttgcaaaaggccgtggactgctcgctgcagctgtctcgccaa
agagccgctgtccgtgagcttgcaccactctttgataaggaaaaagaggcttgtatggaa
gaaattctgaagcttaagtccctgctgagcaccaagagggagcagattgccaccctgcgc
ttggtgcttaaagccaacaaacagacagcagaaatggccctgtcgaacctgaaaagcaag
tatgagactgagaaaaacatggtgactgagaccatgatgaagctgcgtaatgaactgaag
gcactaaaagaagatgctgccacattttcctcactaagagccatgtttgccacacgttgt
gatgagtatttaactcaactggatgagatgcagaggcagcttgcagcagctgaggatgag
aagaagaccctgaactctcttcttcgtatggccattcagcaaaaactggcattaacgcaa
cgtctggaggacttggagttcgaccatgagcaatcgtaccgtccccgcatgggcaagctg
tccaaattgaggaccacaccaaaagtaagtggaacagtcaccttgccccttcctgacacc
tcatccacagtagctgaggcaattgcagaaacctcagctctctcttcccctatcgtagcc
actcccttgctctgctctgacccaggcagccccccttcactggaagccccttcatctcca
gcttcatcattttcttcctcctggactcccccagtaactccctacagccggggccacacc
cactggactgtgggtatgcgggcaaacatggtggagccacactcccatgttgtcaatgtg
tcccgacccaccagcttgaccccttgctatgcagttgagtcacgctactcatcgggttca
cttcccccctccccctatcgttcgcccatcctgggcagttatcgctccacctggagttcg
cccagatctcgtccactctccacagtcctaacgcaccccactcacacaaccagatacact
tccccaactttctcctcctatggccaatcatacgcaagaaattacacttctcaacaccct
cgctactga
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