Silurus meridionalis (southern catfish): 124401853
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Entry
124401853 CDS
T08004
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03430
Mismatch repair
smeo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124401853 (mlh1)
03460 Fanconi anemia pathway
124401853 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124401853 (mlh1)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
124401853 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
124401853
NCBI-ProteinID:
XP_046730336
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Position
2:complement(25577853..25611152)
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AA seq
715 aa
AA seq
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MAGMIRRLNETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVSVKEGGLKLIQIQD
NGSGIRKEDLQIVCERFTTSKLQTFEDLTSISTYGFRGEALASISHVAHVTITTKTADEK
CAYRASYCDGKLKAPAKPCAGNQGTLISVEDLFYNVQTRRKALKSPSEEYSRIVEVVSRY
AIHNSGKSFTVKKHGDMVADVKTLANASVLDNIRVIFGVALSREMMEVGCEDQKLAFKLK
GYISNANYSVKKCTFILFINHRLVESSALKKAIEAVYTAYLPKNTHPCLYLSLEIAPHNV
DVNVHPTKHEVHFLHEDCIIGSIQKHIESKLLGSNSSRTYFTQALLPGLSASVSGVKTSS
SSTADPSDRVCANQMVRTDSKAQKLDAFLQPANNLSSVPCLVASLPEPALATEKFAYEIN
DCPEDFLANASNDMMPDGAQVQSEAPVSSTIDSDVEMEDVTVSCTPLRRVIRLTSVKELQ
NEITDQVHEGLQEMLHNHSFVGCINPQWSLIQHQTKLYLLNNTKLSQELFYQILMHDFGN
FSVLWFLNPAPLYDLAILALDCEESGWTEEDGPKEGLAQYIVDFLKKKAEMLEDYFSVKI
DMDGNLTGLPHLLANYSPVMEGLPLFILRLATEVNWDSEKDCFRDFSKECSYFYSVRKEY
ILEKETEAEKSWQWKVEHILFKALRSLSPPKHFSEDGSILQIANLPDLYKVFERC
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcatgatccggagattgaatgagacggttgtgaaccgcatcgctgctggagaa
gtcattcaacgacctgctaatgcgattaaagaaatgattgagaactgtctggatgcaaag
tccacgaacattcaggtgtctgtcaaagagggaggcctgaagctgattcagattcaggat
aatggctctggaattaggaaagaagacctgcaaattgtatgtgagcggttcacaaccagc
aagcttcaaacctttgaggatcttacatctatttcaacctatggattcagaggagaggca
cttgccagcataagccatgtagcccatgttacaattaccacaaaaacagcagatgaaaaa
tgtgcttaccgagcaagttactgtgatgggaaactaaaggccccagcgaagccttgtgct
ggaaaccaagggacactgatctcagtagaagacctgttctataatgtacaaacccgaagg
aaagctctcaaaagccccagtgaagaatattccaggattgtggaagtagtgagtagatat
gccattcacaattctgggaaaagctttactgtcaaaaagcatggagacatggtggctgat
gtgaagactttggctaatgcctcagttttggacaacattcgtgtgatatttggagtagca
ctaagcagggagatgatggaagtggggtgtgaggatcagaagcttgctttcaaactaaag
ggttatatatcaaatgctaactactcagtcaagaagtgtaccttcatcctgttcatcaat
catcgtttagtggaatccagtgccttgaaaaaagccattgaagccgtctatacagcatat
cttcccaaaaacacacatccttgcctttatctcagtttagaaattgcacctcataatgtt
gatgtgaatgtgcaccccactaagcatgaagtgcattttctacatgaagactgcataatt
ggaagcattcagaaacacattgagagtaaactacttggatccaattcttcccgcacttat
tttacacaggctttactgcctgggctttcagcatctgtcagtggtgtaaaaacctcaagc
agttcaactgctgaccccagtgatcgtgtctgtgctaatcaaatggtgcgaactgacagc
aaggcccaaaaattagatgcttttctacagccagcaaataacctttcttcagttccttgc
cttgtagcaagtcttccggaacctgccctagctactgagaagtttgcatatgaaataaac
gattgtcctgaggattttttggccaatgcatcaaatgacatgatgcctgatggtgcacag
gtccagtcagaggcacccgtgagcagtactattgattctgatgtggaaatggaagatgtg
actgtgtcctgcactcccttgagacgtgtcatcaggctaaccagcgtgaaggagctacaa
aatgaaatcacagatcaagttcatgaaggtttgcaggagatgctgcataatcattcattt
gttggatgcatcaatccccagtggtctctaatccaacaccaaaccaaactgtacctgtta
aacaatactaagctcagtcaggagctgttttaccagattttgatgcatgattttggtaac
ttcagtgttctttggttcttgaatccagcccccctgtatgacttagccatcttggcactg
gactgtgaggaaagtggctggacagaggaggatgggcctaaagaagggctggcccagtat
atagtagatttcttgaaaaaaaaagctgaaatgttagaagactatttctctgtgaagata
gacatggacgggaatctgactggtcttccacatttgctggctaactatagtcctgtaatg
gagggtctgccattgttcatcctgcgcttagccacagaggtgaattgggacagtgagaag
gattgttttcgtgacttcagtaaagagtgcagttatttctactccgtaagaaaagagtac
atattggagaaagaaacagaggcagagaagagctggcagtggaaggttgaacacattctc
ttcaaagcattgcgctctcttagcccgcctaaacactttagtgaagatggcagcatcctc
cagatagcgaaccttcctgacctctacaaagtgtttgagagatgctaa
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