KEGG   Silurus meridionalis (southern catfish): 124401853
Entry
124401853         CDS       T08004                                 
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03430  Mismatch repair
smeo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    124401853 (mlh1)
   03460 Fanconi anemia pathway
    124401853 (mlh1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smeo03400]
    124401853 (mlh1)
DNA repair and recombination proteins [BR:smeo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     124401853 (mlh1)
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 124401853
NCBI-ProteinID: XP_046730336
LinkDB
Position
2:complement(25577853..25611152)
AA seq 715 aa
MAGMIRRLNETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVSVKEGGLKLIQIQD
NGSGIRKEDLQIVCERFTTSKLQTFEDLTSISTYGFRGEALASISHVAHVTITTKTADEK
CAYRASYCDGKLKAPAKPCAGNQGTLISVEDLFYNVQTRRKALKSPSEEYSRIVEVVSRY
AIHNSGKSFTVKKHGDMVADVKTLANASVLDNIRVIFGVALSREMMEVGCEDQKLAFKLK
GYISNANYSVKKCTFILFINHRLVESSALKKAIEAVYTAYLPKNTHPCLYLSLEIAPHNV
DVNVHPTKHEVHFLHEDCIIGSIQKHIESKLLGSNSSRTYFTQALLPGLSASVSGVKTSS
SSTADPSDRVCANQMVRTDSKAQKLDAFLQPANNLSSVPCLVASLPEPALATEKFAYEIN
DCPEDFLANASNDMMPDGAQVQSEAPVSSTIDSDVEMEDVTVSCTPLRRVIRLTSVKELQ
NEITDQVHEGLQEMLHNHSFVGCINPQWSLIQHQTKLYLLNNTKLSQELFYQILMHDFGN
FSVLWFLNPAPLYDLAILALDCEESGWTEEDGPKEGLAQYIVDFLKKKAEMLEDYFSVKI
DMDGNLTGLPHLLANYSPVMEGLPLFILRLATEVNWDSEKDCFRDFSKECSYFYSVRKEY
ILEKETEAEKSWQWKVEHILFKALRSLSPPKHFSEDGSILQIANLPDLYKVFERC
NT seq 2148 nt   +upstreamnt  +downstreamnt
atggcaggcatgatccggagattgaatgagacggttgtgaaccgcatcgctgctggagaa
gtcattcaacgacctgctaatgcgattaaagaaatgattgagaactgtctggatgcaaag
tccacgaacattcaggtgtctgtcaaagagggaggcctgaagctgattcagattcaggat
aatggctctggaattaggaaagaagacctgcaaattgtatgtgagcggttcacaaccagc
aagcttcaaacctttgaggatcttacatctatttcaacctatggattcagaggagaggca
cttgccagcataagccatgtagcccatgttacaattaccacaaaaacagcagatgaaaaa
tgtgcttaccgagcaagttactgtgatgggaaactaaaggccccagcgaagccttgtgct
ggaaaccaagggacactgatctcagtagaagacctgttctataatgtacaaacccgaagg
aaagctctcaaaagccccagtgaagaatattccaggattgtggaagtagtgagtagatat
gccattcacaattctgggaaaagctttactgtcaaaaagcatggagacatggtggctgat
gtgaagactttggctaatgcctcagttttggacaacattcgtgtgatatttggagtagca
ctaagcagggagatgatggaagtggggtgtgaggatcagaagcttgctttcaaactaaag
ggttatatatcaaatgctaactactcagtcaagaagtgtaccttcatcctgttcatcaat
catcgtttagtggaatccagtgccttgaaaaaagccattgaagccgtctatacagcatat
cttcccaaaaacacacatccttgcctttatctcagtttagaaattgcacctcataatgtt
gatgtgaatgtgcaccccactaagcatgaagtgcattttctacatgaagactgcataatt
ggaagcattcagaaacacattgagagtaaactacttggatccaattcttcccgcacttat
tttacacaggctttactgcctgggctttcagcatctgtcagtggtgtaaaaacctcaagc
agttcaactgctgaccccagtgatcgtgtctgtgctaatcaaatggtgcgaactgacagc
aaggcccaaaaattagatgcttttctacagccagcaaataacctttcttcagttccttgc
cttgtagcaagtcttccggaacctgccctagctactgagaagtttgcatatgaaataaac
gattgtcctgaggattttttggccaatgcatcaaatgacatgatgcctgatggtgcacag
gtccagtcagaggcacccgtgagcagtactattgattctgatgtggaaatggaagatgtg
actgtgtcctgcactcccttgagacgtgtcatcaggctaaccagcgtgaaggagctacaa
aatgaaatcacagatcaagttcatgaaggtttgcaggagatgctgcataatcattcattt
gttggatgcatcaatccccagtggtctctaatccaacaccaaaccaaactgtacctgtta
aacaatactaagctcagtcaggagctgttttaccagattttgatgcatgattttggtaac
ttcagtgttctttggttcttgaatccagcccccctgtatgacttagccatcttggcactg
gactgtgaggaaagtggctggacagaggaggatgggcctaaagaagggctggcccagtat
atagtagatttcttgaaaaaaaaagctgaaatgttagaagactatttctctgtgaagata
gacatggacgggaatctgactggtcttccacatttgctggctaactatagtcctgtaatg
gagggtctgccattgttcatcctgcgcttagccacagaggtgaattgggacagtgagaag
gattgttttcgtgacttcagtaaagagtgcagttatttctactccgtaagaaaagagtac
atattggagaaagaaacagaggcagagaagagctggcagtggaaggttgaacacattctc
ttcaaagcattgcgctctcttagcccgcctaaacactttagtgaagatggcagcatcctc
cagatagcgaaccttcctgacctctacaaagtgtttgagagatgctaa

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