Silurus meridionalis (southern catfish): 124401935
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Entry
124401935 CDS
T08004
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a
KO
K19472
homeobox protein SIX2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124401935 (six2a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
124401935 (six2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
124401935
NCBI-ProteinID:
XP_046730437
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All DBs
Position
2:complement(22691654..22695138)
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AA seq
297 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNTNSHNALTSSMNGNKTMMGSSDEDKTPIGTPDHTSSSPALLLTSAS
GLQPLHGLAAPPAPSAVPVPSAVNVTSADSMHHQHHHHSLHDTILNPMASNLVDLGS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcttccgactttcggctttacgcaagagcaagtagcgtgcgtgtgcgaagtc
ctgcagcagggcggcaacatcgagcgcctgggccggtttctgtggtcgttgcccgcctgc
gaacatctccacaagaacgagagcgtgctcaaggccaaggccgtggtcgctttccaccgg
ggaaactttagagagctatacaaaatcctcgagagtcaccagttctcgccgcacaaccac
ccgaaactccagcagctgtggctcaaggcgcattacatcgaagcggagaagttgcgcgga
cggccgttaggagctgtgggcaagtaccgggtgcggaggaagttcccgctgcccaggtcc
atctgggatggcgaggagacaagctactgctttaaggagaagagtcgtagcgtgctgaga
gagtggtacactcataatccgtatccttcaccacgggaaaagcgcgagctggccgaagcc
accggattgaccaccactcaggtcagcaactggttcaaaaaccggaggcaacgcgaccgc
gcggcggaggccaaagaaagggaaaacaacgagaactccaacacgaacagccacaacgca
ctcacgtcgtccatgaacggaaacaagacgatgatgggcagctcggacgaggacaaaacc
cccatcggaactccagatcacacgtcgtcgagccccgcgctgctgcttacctccgcctcc
ggtctccaacctctccacggcctggctgctccgccggcgcccagcgcagtacccgtgcca
agcgccgtgaatgtaacaagcgcggactcaatgcaccaccaacaccaccaccacagcctg
cacgacaccatactgaaccctatggcctccaacctggtcgatctgggctcttaa
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