Silurus meridionalis (southern catfish): 124401985 Help Entry 124401985         CDS       T08004                                  Symbol pbrm1 Name (RefSeq) protein polybromo-1 isoform X1   KO K11757   protein polybromo-1 Organism smeo  Silurus meridionalis (southern catfish) Pathway smeo03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:smeo00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     124401985 (pbrm1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:smeo03021]     124401985 (pbrm1)    03036 Chromosome and associated proteins [BR:smeo03036]     124401985 (pbrm1) Transcription machinery [BR:smeo03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      124401985 (pbrm1) Chromosome and associated proteins [BR:smeo03036]  Eukaryotic type   Chromatin remodeling factors    PBAF complex     124401985 (pbrm1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1 Motif Other DBs NCBI-GeneID:  124401985 NCBI-ProteinID:  XP_046730496 LinkDB All DBs Position 19:14938953..14958826 Genome browser AA seq 1648 aa AA seqDB search MGSKRRRATSPSSSVSGGDFEDSQPAPTSSSGRKRRRTANIPTVDPIAVCHELYNTIRDY KDDQGRMLCELFIRAPKRRNQPDYYDVVSQPIDMMKIQQKLKMEEYDDVEQLTLDFQLLF NNTKTYYKPDTPEYRAACKLWDLYIRTKNEFVQRGDYDEDDDDGDDARETPGGAMEDESV RVVPQAAASLKEVLEQLLDTVLRHSEHGRLVSELFQRLPSKIQYPDYYAVIKEPIDLKAI AQRIQIGYYKSVNHMSKDIDLLVKNAKTYNEPGSQVFKDANTIKKIFSQKKMELEHMEPI KSSIRIRNRKSVHGDRLSSITMALQYGSESDEDGILTGSVHYDEGESEAESIHSNMDMTN PIFQMFEAIRGGRNSQGQLIAEPFLQLPSRKDYPDYYQQINQPISLQQIREKMKNNEYES VEQMDTDLNVMFENAKRYNVSNSHIYKRALKLQHILQMKRKELGRREDEDGDSMLSSTLS DGSTTKRKSYKKNTKKNRLKSLYQAVTETRELGTGRRLCDLFMVKPSKKDYPDYYKIILE PMDLRTIDHNIRADRYSNEDVMVEDMKLMFRNARHYNEEGSQVYNDANTLEKIMREKKRE LGPAPEDDDIISPKLKIRKSGISPKKSKYLTPLQQKLNELYEAVKNYTDKRGRRLSTIFL RLPSRAELPDYYLAIKRPIDMERVKSHMLANKYQDVDALVEDLVLMFNNACTYNEPESLI YKDALVLHKVLLETRRDLEGGDDSNVPDVPRLIQDLIRSLFVSVLGHQDDEGRCYSDSLA EVAAEDPANPDRPRLNFEIIRANVEKGRYKRLDVFQDHMFEVLEKARRMHRTDSEIFEDA VELQHFFIRIRDELCKNGEILLTPALSYTSKHLHSDVEKEKKEKLPKEFEEDKLKREEEK KEAEKSEESSAGTWQGGLQRTYSQDCSFRDRMYHVGDYVYVEPAEANLQPHIVCIERLWQ DDTGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKIPVNKILGKCVVMFVKEYFK LSPEGFRSEDVFVCESRYSAKTKSFKKIKMWTMPLSSVKFVPRDVPLPVVRVASMFAPKP ESEKAAEPTDDNKTVNSVIEKEREDVPVEMSNGEPGCQYYDQLCYNDMWLKVGDCVFIRS HGLVRHRVGRIEKMWVRDGAAYFFGPIFIYPEETEHEPTKMFYKKEVFLSNLEESCPMTC ITGKCAVSSFKDYLSCRPTEVPEDDVLLCESRYIESEKQMKKFKGLKRFSLSAKVVEDEI YYFRKLIVPQKEPSPLLDKKIEELEAKFADMTDEELEELGDDDGDGLDSQGMSQLQTPLH SDMDMLSYTPIQSTPKSFKGLSKKEGAKRKINMSGYILFSSEMRAVIKAQHPDFSFGELS RLVGTEWRNLESAKKAEYEERAAKVAEQQERERAAQQQNSPRAGTPVGAVMGVVPAPSHM GMLNHSMTPMAVMMGSILQPPMLPLPGPVDGIVSMAGIPPHFLPFLHRHLPPSMYGFPGM PYPGLNGMGPGTAGNPYGAQAGMTGANQQAPPPYPGQGQVGQPSLQQPSTPIFVAPPPKP QRLLHSEAYLRYIEGLSAESSTVSKWDQTLSARRKDVRLTKEQESRLPTHWLKSKGAHST MADALWRLRDLMLRDTLNIRQTYNIQDI NT seq 4947 nt NT seq  +upstreamnt  +downstreamnt atgggctctaagcggaggagggccacctctccgtccagcagcgtgagcggtggagacttt gaagacagccagccggccccgacctcctcgtctggccgcaagaggagaagaacagcaaac attcctacagttgatcctattgcagtgtgtcatgaactttacaacactatcagagactat aaggatgaccagggcagaatgttgtgtgaactttttatcagagctccaaagagaaggaac cagccagattactatgatgtagtgtcacagcctatcgacatgatgaagatccaacagaag ctgaaaatggaggagtacgatgatgtggagcagctcacacttgatttccagctcctcttt aacaacactaagacttactacaaacctgataccccagagtatcgagctgcgtgtaaatta tgggacctttacattcgcacgaaaaatgagtttgtgcagcgaggagactatgacgaagac gacgacgacggtgacgatgcacgagaaactccaggaggtgccatggaggatgagagtgta cgggttgttcctcaggctgcagccagtcttaaggaggttttggagcagttactcgatacg gtgttgagacacagtgaacacggacgactcgtcagcgaactgttccagagacttccttct aaaattcaatatccggattattatgctgttatcaaagagccaatcgacctcaaggccatt gcacaaaggatacagatcggctactacaaaagtgtgaatcatatgtctaaagacattgac ctgctagtcaaaaatgccaaaacatacaatgagcctggttcacaggtattcaaggatgca aacaccatcaaaaagatcttttcccagaagaagatggagcttgagcacatggagcctata aaaagcagcatccgtataagaaacagaaaatctgtgcatggggacagactctcctctata accatggctttacagtacggctcagagagcgacgaagacggcatccttacaggctctgtg cattatgacgagggagaatcagaggctgagagcatccattccaacatggacatgaccaat cccatctttcagatgttcgaggctataagaggaggcaggaacagtcaaggccagctcata gctgagccttttcttcagctgccctcccggaaggactatccagactactatcagcagatt aaccagcccatctccctccagcagattcgtgaaaagatgaagaataacgaatacgagagt gtggagcagatggacacggacctaaatgtgatgtttgaaaacgcaaagcgctacaacgtc tccaactcccacatctacaaacgggctctgaaacttcagcacattcttcagatgaaaaga aaagagctgggaaggagagaggatgaggatggtgacagtatgctgtcatccactctgtca gatggcagtaccaccaaacgcaagagttataaaaagaacacaaagaagaatcgtttgaag tcgctgtaccaggccgtgaccgagactcgagagctgggcacgggtcgtaggctctgtgac ctgtttatggttaaaccttctaagaaagactatccagactactataagatcatcctggag cccatggacctgcgtacgattgaccacaacatccgcgcagacagatactccaacgaggac gtcatggtggaggacatgaagctgatgttccgcaatgcgagacactacaacgaagaaggc tcacaggtgtataacgacgcgaacacgctggaaaagataatgagggagaaaaagagagaa ctggggcctgcgccagaagacgacgacatcatctcaccgaagcttaaaataagaaagagt ggcatctccccaaaaaaatccaaatacctgacgcctcttcagcagaagctaaacgagctt tatgaggcagtcaagaactacacagacaagcgtggccggcgcctcagcaccatcttcttg cgcctgccgtcccgagctgaactcccagactactacctggccatcaagagacctatagac atggagcgggtcaaaagccacatgctggccaacaagtaccaggacgtggacgctctggtg gaggacctggtgctgatgtttaacaatgcgtgtacctataacgagcctgagtcactcatc tacaaggatgctctggtgcttcacaaggtccttctggagaccaggagggacttggaagga ggcgacgactccaacgttccggacgtacctcgcctcatccaggacctgattcgcagcctc ttcgtttcagttctgggtcaccaggatgacgaaggtcgttgctatagtgactcgctggct gaggtggcagccgaggacccagccaatccagacaggcctcggctgaacttcgaaatcata cgagctaacgtagagaaagggcgctataagaggttagacgtcttccaagaccacatgttt gaagtgctcgagaaggccaggagaatgcacaggacggattctgagatcttcgaggacgca gtggagctgcagcacttctttatccgaatccgagatgaactgtgtaagaacggagagatc ctgctgaccccggcactcagctacacctccaaacacctgcacagtgatgtggagaaggag aagaaagagaagctgcccaaagagtttgaggaagacaagctcaaaagggaggaggagaaa aaagaagcagagaaaagtgaggaatcatctgccgggacgtggcaaggaggcctccagcgt acctacagtcaggactgcagctttcgtgacagaatgtatcacgttggggattatgtctac gtagagcctgctgaggcaaacctccagcctcacatagtctgtatagagcgcctctggcag gatgacacaggagagaaatggctttatggctgctggttttacagacccaatgagactttc catctggccacacgcaaatttctggagaaggaagtctttaaaagcgactactacaacaaa attcctgttaataaaattctgggcaaatgtgttgtcatgtttgttaaggaatacttcaag ctcagccctgagggatttagatcggaggacgtgtttgtgtgcgagtcccgctattcggcc aaaaccaagtcgttcaaaaaaatcaagatgtggaccatgcctctgagctcggtcaagttt gtcccacgtgacgtgcccttgccagtggtccgggtggcctctatgtttgctccgaaacca gaaagcgagaaagctgccgagccaacagacgacaacaaaacagtgaactctgtcattgaa aaggagagggaggacgttcctgtggagatgagcaacggtgagcctggttgtcagtattac gatcagctctgttacaacgacatgtggctcaaagtgggagactgcgtcttcattcgctct cacggcttagtgcgccaccgtgtgggcaggattgagaaaatgtgggtacgggacggggcc gcctactttttcgggccgatctttatctaccctgaggagaccgaacacgagcccaccaag atgttctataaaaaggaggtatttctaagcaatctggaggagtcctgccctatgacctgc attactggaaagtgcgcagtgtcctcgtttaaagactacttgtcgtgccgtcccaccgaa gtgcctgaagacgatgtgttgctctgcgagagtcgctacattgaaagcgagaagcagatg aagaaatttaaagggctgaagagattctccctctccgccaaagtagtagaggatgaaatc tattattttaggaagctgatcgtgcctcagaaggaaccgtctcctcttctggacaagaag atcgaggagctggaggccaagtttgccgatatgaccgacgaagaactggaagaacttggg gatgatgacggggatggcttagacagccagggaatgtctcagcttcagacaccgctacac agcgatatggacatgttatcatacacaccgatacagtccacaccgaaatcctttaagggc ctgtcaaagaaggagggtgcgaagaggaagatcaacatgagcggctacatcctgttcagc agtgagatgcgggcggtgatcaaggcccagcacccggacttctccttcggcgaactcagc cgtcttgtgggcacagagtggagaaatctggagtcggccaagaaagccgagtacgaagaa cgggcagccaaagttgcagagcagcaggagcgcgagagagcggctcagcagcagaactcc ccgagagcaggtaccccagtaggggcagtcatgggggtggtgcctgcgccgagccatatg gggatgcttaaccacagcatgacgcctatggcagtcatgatgggtagcattcttcagcca cccatgctgccgctgccaggtccagttgatggcattgttagcatggctggcataccgccg catttcctgcctttcttacaccgccatctcccgccaagcatgtatggcttccctggcatg ccgtacccgggtctgaatggaatgggtcctggaactgcaggaaacccctatggagcccag gcaggaatgactggtgccaatcagcaggccccgcccccttacccgggacaaggtcaggtg ggccagccgtctctccaacagccttccaccccgatatttgtggctcctccaccgaaaccc caacgtctccttcactctgaggcgtacctgaggtacattgaggggctcagtgccgagtcg tctaccgtcagcaaatgggaccagacgttgtcagctcgaaggaaagacgtacgcctcacg aaagaacaggagagcaggcttccgactcactggctgaagagcaaaggggcgcacagcacc atggccgacgccctgtggcgcctgagagacctcatgttaagagacacgctaaacatccga cagacatacaacatccaggacatctaa

DBGET integrated database retrieval system