KEGG   Silurus meridionalis (southern catfish): 124402009
Entry
124402009         CDS       T08004                                 
Symbol
smug1
Name
(RefSeq) single-strand-selective monofunctional uracil-DNA glycosylase 1 isoform X1
  KO
K10800  single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    124402009 (smug1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smeo03400]
    124402009 (smug1)
DNA repair and recombination proteins [BR:smeo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     124402009 (smug1)
 Prokaryotic type
     124402009 (smug1)
SSDB
Motif
Pfam: UDG NAD_binding_7 DUF2652
Other DBs
NCBI-GeneID: 124402009
NCBI-ProteinID: XP_046730548
LinkDB
Position
19:complement(938156..941518)
AA seq 284 aa
MLGHNDPPSRKETGDQTQVEEQQSEKIILNSDEFFPNCSPVAARFLQAELELSACLRTLT
FRDPVRYIYNPLEYAWDTHRLYAEKYCHGRQSVLFLGMNPGPFGMAQTGVPFGEVKATRD
WLKICGEVGHPPNEHPKRPIRGFLCSQSEVSGARFWSFFQQVCGEPQHFFRHCFVHNLCP
LMFMTETGRNVTPPEMPAEDREALLLHCDAALCQVVRALGVSMVIGVGKVAEQRARRALA
EAGVEVKVEGIMHPSPRNPLANKGWASVARTKLEQIGVLDLLLK
NT seq 855 nt   +upstreamnt  +downstreamnt
atgctaggacacaatgatcctccgagcaggaaggagactggagaccaaactcaggtggag
gaacagcagtcggagaaaatcatcttaaactctgatgaatttttcccgaactgttcccca
gtggcagctcggtttctccaggccgagctggaacttagtgcctgtctgcgaactttgacc
ttcagggatccggtgcgttatatatacaacccgctggagtacgcgtgggacacacaccgt
ctctatgctgagaaatactgccacgggagacagagcgtcctgttcctggggatgaacccg
ggaccgttcggcatggcacagaccggagttccgtttggtgaggtaaaggccacccgcgat
tggctgaagatctgcggtgaggtgggtcatcctcctaacgagcatccgaaacgtccaatc
agaggctttctctgctctcagagcgaagtgagtggcgcgcggttctggagttttttccag
caggtctgtggagaaccgcaacactttttccgtcattgttttgtccataacctgtgccct
ctgatgttcatgaccgagacggggaggaacgtgaccccccccgagatgcctgctgaagac
cgggaggccctgctgctccactgcgacgctgcgctgtgccaggtggtacgtgccctcggt
gtttccatggtgatcggagtgggcaaggtggcagagcagcgagctcgacgtgccctcgct
gaagccggagtggaggtgaaggtagagggtatcatgcacccttcaccccggaacccactg
gctaacaaaggttgggcttctgtggctcgaaccaagctggagcagataggggtgttggat
ttactcctcaagtga

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