Silurus meridionalis (southern catfish): 124402015
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Entry
124402015 CDS
T08004
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03013
Nucleocytoplasmic transport
smeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124402015 (thoc7)
09122 Translation
03013 Nucleocytoplasmic transport
124402015 (thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124402015 (thoc7)
03041 Spliceosome [BR:
smeo03041
]
124402015 (thoc7)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124402015 (thoc7)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124402015 (thoc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
COG6_N
V_ATPase_I
DASH_Dad2
Peptidase_S10
OVT1
DUF7201
Motif
Other DBs
NCBI-GeneID:
124402015
NCBI-ProteinID:
XP_046730558
LinkDB
All DBs
Position
19:complement(15452313..15455737)
Genome browser
AA seq
203 aa
AA seq
DB search
MGSITDDEVIRKRLLIDGDGAGDDRRINVLLKSFTKWCHTNVTPEEGFAQYQRMLGSLSQ
CEFSMGKTLLVYDMNLKEMENYEEIYADIERSISGAHEKISECKKEIQRAKRIRKNRQEY
DALAKVIQQHPDRHKTMEQLKALDKELQQLSQIKENVEDKLELRKKQFHVLLSTIQELQQ
TLENDEKMENDEMSQESPMENGD
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgggctccataacagacgacgaggtgattcgcaagcggctgctgatcgacggcgacggg
gccggagatgaccgccgcatcaacgtcctcctgaaaagcttcaccaaatggtgccacacc
aacgtgacgccagaagaagggtttgctcagtaccaaaggatgctgggaagcttgtcccag
tgtgagttctcgatgggaaagacgcttctggtgtacgacatgaacctgaaggagatggag
aactacgaagagatctacgcagacatcgagcgaagcatatcaggcgcacatgagaaaatc
agcgagtgcaaaaaagagatccagcgagcaaagaggatacgaaagaaccgccaagagtat
gacgctttggcaaaagtcatccaacagcatccagacagacacaaaacgatggagcagctg
aaagcgctcgacaaagaacttcaacagctctcacaaatcaaggagaacgtagaagataag
ttggagctgcgcaagaaacagttccatgtgcttctcagcaccatccaggagcttcagcag
acgctagagaatgatgaaaagatggagaatgacgaaatgtcccaagaaagccccatggaa
aatggagattag
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