Silurus meridionalis (southern catfish): 124402041
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Entry
124402041 CDS
T08004
Symbol
itpr1b
Name
(RefSeq) inositol 1,4,5-trisphosphate receptor type 1 isoform X1
KO
K04958
inositol 1,4,5-triphosphate receptor type 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04020
Calcium signaling pathway
smeo04070
Phosphatidylinositol signaling system
smeo04114
Oocyte meiosis
smeo04140
Autophagy - animal
smeo04210
Apoptosis
smeo04218
Cellular senescence
smeo04270
Vascular smooth muscle contraction
smeo04371
Apelin signaling pathway
smeo04540
Gap junction
smeo04621
NOD-like receptor signaling pathway
smeo04625
C-type lectin receptor signaling pathway
smeo04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
124402041 (itpr1b)
04020 Calcium signaling pathway
124402041 (itpr1b)
04070 Phosphatidylinositol signaling system
124402041 (itpr1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124402041 (itpr1b)
09143 Cell growth and death
04114 Oocyte meiosis
124402041 (itpr1b)
04210 Apoptosis
124402041 (itpr1b)
04218 Cellular senescence
124402041 (itpr1b)
09144 Cellular community - eukaryotes
04540 Gap junction
124402041 (itpr1b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124402041 (itpr1b)
04625 C-type lectin receptor signaling pathway
124402041 (itpr1b)
09152 Endocrine system
04912 GnRH signaling pathway
124402041 (itpr1b)
09153 Circulatory system
04270 Vascular smooth muscle contraction
124402041 (itpr1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124402041 (itpr1b)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124402041 (itpr1b)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124402041 (itpr1b)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
IP3 receptor
124402041 (itpr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ins145_P3_rec
RYDR_ITPR
MIR
RIH_assoc
Ion_trans
C_GCAxxG_C_C
Motif
Other DBs
NCBI-GeneID:
124402041
NCBI-ProteinID:
XP_046730595
LinkDB
All DBs
Position
19:complement(16477536..16593093)
Genome browser
AA seq
2807 aa
AA seq
DB search
MSDKMSSFLHIGDICSLYAEGSTNGFISTLGLVDDRCVVQPEAGDLNSPPKKFRDCLFKL
CPMNRYSAQKQFWKAAKPGGNSTTDTVLLNKLHHAADLEKKQNESENRKLLGSVIQYGNV
IQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDSAGNEGSWFYIQPFYKLRSIGDSVVIGD
KVVLNPVNAGQPLHASSHQLVDNPGCNEVNSVNCNTSWKIVLFMKWSDNKEVILKGGDVV
RLFHAEQEKFLTCDDYRKKHYVFLRTTGRQSATSATSSKALWEVEVVQHDPCRGGAGYWN
SLFRFKHLATGHYLAAEASTEVNPDYEEESQESRSSAGDFIPFNFQLDLEHEALRGRLRT
PNEKVMYTLISVPDGNDISSIFELDPTTLRGGDSQVPRNSYVRLRHLCTNTWVHSTNNPI
DKEEEKPVMLRIGTSAIKEDKEAFAIVPVPPAEVRDLDFANDASKVLASIAGKLEKGTIT
QNERRFVTKLLEDLVFFVVDIPNSGQDVLEIMVNKPNRERQKLMREQNILKQIFKLLQAP
FTDSGDGPMLRLEELGDQRHAPFRHICRLCYRVLRHSQQDYRKNQEYIAKQFRFMQKQIG
YDVLAEDTITALLHNNRKLLEKHITAAEIDTFVSLVRKNREPRFLDYLSDLCVSMNKSIP
VTQELICNAVLDPANADILIETKLVLSRFEIDSLNVGEPPLETEEDVEEVWLFWKDSGKE
IRSKSIRELAQDAKEGQKEDQEVVSYYRYQLNLFARMCLDRQYLAINKISGQLDVDLILR
CMSDEDLPYDLRASFCRLMLHMHVDRDPQEPVTPVKYARLWSEIPSKIAIDDYDNDGTSR
DEIKERFALTMEFVENYLRIVVCQNIPFSDKEKNKLTFEVVNLARNLIYFGFYNFSDLLR
LTKILLAILDCVHVSTIYPINKMEKGDENKAGSNVMRSIHGVGELMTQVVLRGGGFLPST
PTTPPDGEVGKTQTEPEKEDILVMDTKLKIIEILQFILNVRLDYRISCLLCIFKKEFDGS
NAQTDTLANPNANGNTNANATTTATTNGDGPNSIPALDFEKIEEQAEGIFGASDENTPLD
LDDHGGRTFLRVLLHLTMHDYPPLVSGALHLLFRHFSQRQEVLMAFKQVQLLVTSQDVDN
YKQIKSDLDQLRSIVEKSELWVYKRQGDDALDGGDGPVESDLKKKGDSSGVENSKTECTS
SYNYRVVKEILIRLSKLCVHEGASGKKSKKQQQRLLRNMGAHAVVLELLQIPYEKGEDVR
MQEIMKLAHEFLQNFCAGNQQNQALLHKHINLFLNPGILEAVTMQHIFMNNFQLCSEIND
RVVQHFVHCIETHGRHVQYLKFLQTIVKAENKFIKKCQDIVMAELVNAGEDVLVFYNDRA
SFQTLVQMMRSERDRMDENSPLMYHIHLVELLAVCTEGKNVYTEIKCNSLLPLDDIVRVV
THEDCIPEVKIAYIDFLNHCYVDTEVEMKEIYTSNHMWKLFENFLVDICRVCNNTSDRKH
ADSMLERYVTETVMSIVTTFFSSPFSDQSTSLQTRQPVFVQLLQGVFRVYHCSWLMPTQK
ASVESCIKVLSDVAKSRAIAIPVDLDSQVNNLFVKSNNVVQKTILNWRMSARNASRRDST
VSASKDYRNIIERLQDIVSALEDRLRPLVQAELSVLVDVLHRPELLFPENTEARKKCESG
GFISKLIKHTKQLLEENEERLCIKVLQTLREMMTKDRGYGEKLIAFDDELDVAELVPPPE
PENFAEDLDPNQPQKQLEDQRRGEALRQILVNRYYGNFKPGGRRDSLTTFSNGPVGPGAQ
SKPPPASSGCSVGARGELSLAEVQCHLDREGASDLVIDLIMNATSDRIFQESILLAIALL
EGGNPVIQRSFFIRLTRDNKSEKFFKVFYERMKLAQQEIKATVTVNTSDLGSKRKDEDAN
DKEAPSKKKVNVAVVTEEVREQLLEASTATKKAFTAYRREVDSDEHLGGGEVQTSSAEKN
QDENEMSVTITIMQPILRLMQLLCENHNRELQNFLRCQNNKNNYNLVCETLQFLDCICGS
TTGGLGLLGLYINEKNVALINQTVESLTEYCQGPCHENQNCIATHECNGIDIIIALILND
INPLGKKRMDLVLELKNNASKLLLAIMESRHDSENAERILYNMRPKELVEVIKKAYMQGE
VEVEHTEEDGEGEEEHAASPRNVGHNIYILAHQLARHNKELQAMLKAGGTYGEGDEALEF
YAKHTAQIEIVRLDRTMEQIVFPVPNICEFLTQESKLRVYYTTERDEQGSKINDFFLRSE
DLFNEMNWQKKLRGTQETSGSADSVPSQPILYWCSRNMSFWSSISFNLAVLMNLLVAFFY
PLEGVRGGTLEPHLSALLWAAMLVSLAIVIVLPQPHGIRALIASTILRLIFSVGLEPTLF
LLGAFNVCNKVIFLMSFVGNRGTFTRGYKAMILDVEFLYHLLYLIICIMGVFVHVFFYSL
LLFDLIYREETLLNVIKSVTRNGRSIVLTAVLALILVYLFSIVGYIIFKDDFILNVDRIP
NKTLGTDGKDKIDAYIRVTEQTATVTSEFLSGGVCQKEGSGPNCSAEATVESVAAVVIED
KERTCDSLLMCIVTVLSHGLRSGGGVGDVLRKPSKEEPLFAARVIYDLLFFFMVIIIVLN
LIFGVIIDTFADLRSEKQKKEEVLKTTCFICGLERDKFDNKTVTFEEHIKVEHNMWHYLF
FIVLIKVKDSTEYTGPESYVAEMIREHNLDWFPRMRAMSLVSSDAEGEQNEIRNLQEKLE
STMKLVSNLSGQLTELKEQMTEQRKQKQRIGLLGHPQHMNVNPQQPA
NT seq
8424 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaagatgtctagtttcctccatattggggacatctgctccctgtatgcagag
ggctccaccaatggtttcatcagcaccctgggcctagtggatgaccgatgtgttgttcaa
ccagaagccggagaccttaacagcccgcctaagaagttccgcgactgtctcttcaagctg
tgtcctatgaatagatactcagcacagaaacagttctggaaagcagcaaaacctggtggc
aacagcactacagacacagtacttctcaacaaactccatcatgcagcagatctggagaag
aagcagaatgaatctgagaacaggaagttgctggggtcggtgattcagtacggcaacgtc
attcagttgctgcatctgaaaagcaataagtacttgacagtaaataagcgcttacctgcc
ctgttggagaaaaacgccatgcgtgtcactctggactcagctggaaacgagggctcctgg
ttctacatccagcctttctacaaactccgatctataggagacagtgttgtgatcggagac
aaagtggtattgaaccctgtaaatgctggacagcctctccatgccagcagccatcagctg
gtggacaatcccgggtgcaatgaggtgaattcagtaaactgcaacactagctggaaaata
gttttgtttatgaaatggagtgataacaaggaggtcattctgaaagggggggatgtagtg
cgactctttcatgccgaacaggagaagttcctaacgtgtgatgactacaggaagaagcac
tacgtctttctgagaaccaccggacgccagtctgccacctcggccaccagcagcaaggca
ctgtgggaagtggaggtggttcagcatgacccatgtcgaggtggtgctggttactggaac
agcctgttcaggtttaagcacttagccacaggacattacctggctgcagaggcgagcact
gaggtgaatcccgattatgaggaagagtctcaagagtctcgttcctcagcgggtgatttt
attccctttaacttccagctggacttggagcacgaggcgttacgaggtcgtctgcgcacg
cccaacgagaaggtcatgtacaccctaatttctgtccctgacggcaatgacatctcctcc
atatttgagctggaccctaccactcttagaggaggggactcccaggtgcccaggaactcg
tacgtgcgactgcggcacctgtgcacaaacacatgggtccacagcaccaacaaccccatc
gacaaagaggaagaaaaaccggtcatgcttcggatcggcacgtcggctatcaaagaagac
aaggaggcctttgctatcgtgcccgtcccccccgctgaggtcagagacttggattttgcc
aatgatgccagtaaagtgttggcgtctatcgctggtaaactggagaagggcacaattaca
cagaacgaaaggaggtttgtgaccaagcttctagaggatttggtgttctttgtagtagac
atccctaacagtgggcaagatgtgctggagattatggtaaacaagccgaatcgtgaacgc
cagaaacttatgcgggaacagaacattctcaaacagatctttaagctcctgcaggctccg
tttacagacagtggtgacgggcccatgctccgtttggaggagcttggcgatcagagacac
gccccttttagacacatctgtcggctatgttacagagtgctccgccattcccagcaggac
tacaggaagaaccaggaatacattgccaaacaattccggttcatgcagaagcagatcggc
tatgacgtgctggccgaggacaccatcacggcgcttctacacaacaaccgcaagctgctg
gagaagcacatcaccgcagctgagattgacaccttcgtcagccttgtgagaaagaaccgt
gagcctaggtttctggattacctctctgatctgtgtgtgtcgatgaacaagtccatccca
gtcacacaggagctgatttgcaatgcagtgctggaccctgctaatgcagacatcctcata
gaaaccaaactcgtgttgtctcggtttgagatcgattctctgaatgttggagagcctcct
ctggagacggaggaagatgtggaagaggtgtggttgttttggaaagacagcgggaaggaa
atccgcagcaagagcattagggagttggcacaggatgccaaggaaggccagaaggaagac
caggaggttgtcagttactacaggtaccagctaaacttgttcgctcgcatgtgcctcgac
cgccagtacttggccatcaacaaaatctcaggtcagctggatgtggacttgatcctgcgc
tgcatgtcggacgaggacctcccgtacgacctgcgtgcttccttttgccgcctcatgctg
cacatgcatgtggatcgtgacccccaggagcctgttacacctgtgaaatacgctcgcctg
tggtccgagatcccctccaagatcgccattgatgattacgataatgacggcactagcaga
gatgaaattaaggagcgtttcgctctcactatggagtttgtggagaattatctgagaatc
gtggtctgtcaaaacattcccttttcagacaaggagaaaaacaaactcacgttcgaggtc
gtaaacctggcaaggaacctcatctactttggcttctacaacttcagcgaccttctgcgg
ctgaccaagatcctgctagccatattagactgcgtgcatgtcagcaccatttatcccatc
aacaaaatggagaaaggcgacgagaacaaagcaggtagtaatgttatgcgttctatccat
ggtgttggggaactgatgacccaggttgtgctacgggggggcggattcttgccctctacc
ccaacaacaccccctgacggagaggtgggcaaaacccagaccgagcctgaaaaggaagac
attctggtaatggacacaaagctgaaaatcatcgagatcctccagtttatcctgaatgtg
cgcttggactacaggatctcctgcctgctgtgcatttttaaaaaagaatttgacggaagc
aatgctcagaccgacactctggctaatcctaatgctaatggtaacactaatgctaatgct
actactacagctaccactaatggggatggtcctaatagtataccagcattagattttgag
aaaattgaagagcaggctgaggggatttttggtgctagcgacgaaaacacaccactagac
ctagatgaccacggaggcagaacgttcctgagagttcttctgcacctcaccatgcatgac
taccctccactggtgtctggggctttacacctacttttcagacacttcagccagagacaa
gaagtgctcatggctttcaaacaggtccagctcctagtgactagtcaggatgttgataac
tacaagcagataaagtctgacctagaccagctgcgctccatcgtggagaagtctgagctg
tgggtgtataagcgccagggggacgatgcgctggacggaggcgacggtccagttgaatcc
gacctcaaaaagaagggtgactcaagtggcgtggagaatagtaaaacagaatgcacaagc
agctataattacagggttgtcaaggagatcctgataaggctcagcaagttgtgtgttcac
gaaggagcatcgggaaagaaaagtaagaaacagcagcagcggctgctgaggaacatggga
gctcatgcggtggtgcttgagctacttcagatcccctacgagaagggtgaggatgttaga
atgcaggagatcatgaagctggctcatgagttcctccagaacttctgtgctgggaaccaa
cagaatcaagcgctgctccacaagcacattaacctcttcctcaatccagggattctggag
gctgtcaccatgcagcacattttcatgaacaacttccagctatgcagtgagatcaatgat
cgcgtggtgcagcactttgtgcactgcatcgagacgcatggtcgccatgtccagtacctc
aagttcttgcagaccatcgtcaaagccgagaacaagttcatcaaaaagtgccaggatatt
gttatggcagagctggtgaacgccggagaggacgtgctggtgttctacaacgacagagcc
tcgttccagacactggtgcagatgatgcgttcagagcgagaccgtatggacgaaaacagc
cctcttatgtaccacatccacttggtcgagctgttagctgtttgcaccgagggcaagaat
gtctacacggagatcaagtgcaactcgctgctgcccctggacgacatcgtccgtgtcgtc
acacatgaggactgcatcccagaggtgaagatcgcatatatcgacttcctaaaccactgc
tatgtggacacagaagtggagatgaaggagatctacacaagcaaccacatgtggaagctt
tttgagaactttctggttgatatatgcagggtctgcaacaacacgagcgaccgcaaacat
gctgactccatgctggagcgctacgtcaccgagacagtcatgagtatcgtcaccactttt
ttcagctcccccttttccgatcagagcactagtttacagacccgccagccggtctttgtg
cagctgttgcagggtgttttcagggtgtaccactgtagctggctcatgcccacccagaag
gcatcagtggagagctgcatcaaagtcctctctgacgtggccaaaagtcgggcgatcgcc
attccggtcgacctggacagccaggtaaacaacctgtttgtaaaatctaacaacgttgta
cagaagaccatcctgaattggaggatgtctgctcggaacgcctccaggcgagactccaca
gtcagcgcgtccaaagactacaggaacattatcgagaggctgcaggacattgtctctgca
ctggaggaccgtttaaggcccctggtgcaggctgaactctcagtcctggttgacgtcctt
catagacccgagctgctcttccccgagaacacggaggcccggaagaagtgtgagagtgga
ggtttcatctctaagttaataaaacacaccaagcagctgttggaggaaaatgaggagcgt
ttgtgcattaaggttctccaaactctcagggaaatgatgaccaaagaccggggttatgga
gagaagctgattgcctttgacgatgagctggatgtggctgagctggttccccctccggag
ccagagaactttgccgaggaccttgatcccaatcagccccagaagcagttggaggatcag
agacggggtgaagctttaaggcaaatccttgtgaatcgttactatggcaactttaaacca
ggaggacggagggacagcctgaccactttcagcaatggacccgttggccctggggcacag
agtaaacctcccccagcgtcttctggatgttcggtgggagcccgaggcgagctgagcctg
gctgaggttcagtgccacctggacagagagggagcgtctgacctggtcatcgaccttatc
atgaacgccaccagcgatcgcatctttcaggagagcatcctgttagccattgccctgctc
gagggaggaaaccctgtcatacagaggtcgttctttatcaggctgacgagggacaacaag
tcggagaagttttttaaggtgttttatgagcggatgaagctggcacagcaggagatcaaa
gccaccgtgacggtaaacaccagcgatttgggcagcaagcgcaaagacgaggacgcgaat
gacaaggaggcacccagcaaaaagaaagtaaatgtcgctgtggtcaccgaagaggtacgc
gagcagcttctggaagcttccacggccacaaagaaggctttcaccgcgtaccgacgggag
gtagactcggacgaacatctgggtgggggcgaagtccaaaccagctcggcagagaagaat
caggacgagaacgagatgagtgtcaccatcaccatcatgcagcccatcctgcgactcatg
cagctgctctgcgagaaccacaaccgcgagctgcagaacttcctgcgctgtcagaacaac
aagaacaattacaacctggtgtgcgagacgctgcagttccttgactgcatctgtggcagc
accacaggaggcctgggtctgctggggctctacattaatgagaagaatgtggctctcatc
aaccaaaccgtggagagcctcaccgagtactgccagggcccctgccacgagaaccagaac
tgcatcgcaactcatgagtgcaatggcattgacatcattatcgcacttattttaaacgac
atcaaccctctgggcaagaagaggatggaccttgtgctagaactgaagaataacgcctcc
aagttgcttctggccatcatggagagccgtcacgacagcgagaacgcagagcggatcttg
tacaatatgaggcctaaagaactggtggaggtgataaagaaggcgtacatgcaaggagag
gtggaagtagagcacaccgaggaggacggggagggcgaggaagagcacgccgcctccccg
cgcaacgtcggacacaacatttacatcctggcccatcagttggccagacataacaaggag
cttcaggccatgctgaaagcaggaggaacgtacggtgagggtgacgaagctctggagttt
tatgccaaacacaccgctcaaatagagatcgtgcgcctggaccgcaccatggagcagata
gtcttccccgtgcccaacatctgcgagttcctcacgcaggagtctaagctgcgcgtgtac
tacacaacagagcgcgacgaacagggcagcaaaatcaacgacttcttcctgcgctctgag
gacctcttcaatgagatgaactggcagaagaaactgcgaggtactcaagagacctctggt
agcgcagactccgtgccctctcagccaattctctactggtgctcaagaaacatgtctttc
tggagcagcatctccttcaacctagccgtcctcatgaacctgctcgtggccttcttttac
ccactggagggggtccgcggaggaactctcgagcctcatctctcggcgttgttgtgggcg
gccatgttggtttctctggccattgtgattgtgctgcctcagcctcacgggattcgagct
ctgatcgcgtccaccatcctgcgactcatcttctctgtgggccttgaacccacgctcttc
ctgctcggagcgttcaacgtgtgcaataaggtgatcttcctgatgagttttgtgggaaat
cgggggacgttcacacggggttataaagccatgatcctggacgtggagttcctgtaccat
ctcctctacctcattatctgcatcatgggtgtcttcgttcatgtcttcttctacagcctg
ttgcttttcgatctgatctaccgggaggaaactttgctgaacgtgatcaagagtgtgacg
aggaacgggcgctcgatcgtgctcaccgccgtgctcgcccttatcctcgtctatctgttc
tccatcgtgggatacatcatcttcaaggacgacttcattctgaatgtggaccgaattccg
aacaaaactcttggtacggacggcaaggacaaaatagatgcttacattagagttaccgaa
caaaccgccactgtgacgagcgagttcctgtcaggtggggtgtgtcaaaaagaaggtagt
ggaccgaactgttcagcggaggccacggtggaatctgtggcagcagtggtgatcgaggat
aaagagcgaacgtgtgactctttgctcatgtgcattgtgaccgtactcagccatggcctc
cggagcggcggcggagtcggagacgtgttacgaaaaccttctaaagaggagcctttgttt
gcagccagagtgatctacgacctgctcttcttcttcatggtcatcatcatcgtcctaaac
ctgatcttcggtgtcattatcgacacctttgccgatctaagaagtgaaaagcagaagaaa
gaggaggtcctcaagaccacctgtttcatctgtggcttggagagggacaagttcgacaac
aaaactgtgacattcgaggagcacatcaaggtcgagcacaacatgtggcactatctgttc
tttattgtgcttattaaagtgaaggactcaaccgagtacacaggacccgagagctacgta
gctgagatgatcagggagcacaacctggactggtttcctcggatgcgggcgatgtcgctg
gtgagcagtgatgcggagggcgagcagaacgagatcaggaacctgcaggagaaactagag
tccacaatgaaactggtctccaacctgtccggtcagctcacggaactgaaagagcagatg
actgaacagcgtaagcagaagcagaggattggactcctcggacatccccaacatatgaat
gtgaaccctcagcagcctgcctga
DBGET
integrated database retrieval system
