Silurus meridionalis (southern catfish): 124402047
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Entry
124402047 CDS
T08004
Symbol
bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124402047 (bhlhe40)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
124402047 (bhlhe40)
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
DUF5365
Motif
Other DBs
NCBI-GeneID:
124402047
NCBI-ProteinID:
XP_046730634
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Position
19:complement(16468909..16472983)
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AA seq
404 aa
AA seq
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MERITSAQPPPCLAKQNPMDMAAISGMDFPMYVYKSRRGVKRGEDSKDTYKLPHRLIEKK
RRDRINECIAQLKDLLPEHLKLSTLGHLEKAVVLELTLKHVKALNSLLEQQQQQIISLQN
GMQIGDHTNGSLEKSEEMFRSGFHLCAKEVLQYMASQENARDLTPTHIINHLHKVASELP
QRPISPRSDSPSPAYKGHTVREKPMVAPVRKPEGHTKNCVPVIQRTYPHSSEQSGSDTDT
DSGYGGELDKDKRDSGGQRASYYIKEGAELKYGIKEEWDEPQAKRQRSDSSEDESLLGRS
GYAGFSAHQPPLCMPFYLLPPVSAAAAAAAYLPVLEKCWYPGGMPMLYPGIGGSTPCLSP
EKLPMSLVLSPRVASPTTSHAHTDSTVLHQALKHVPPLNLETKD
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggagcggattacgagcgcacagcctcctccatgtttggctaaacagaacccgatggac
atggctgccatttcgggcatggatttccccatgtacgtctacaaatcccgcagaggtgtg
aaacgaggcgaggacagcaaggacacgtacaagctgccgcatcgtctgatcgagaagaag
agacgagacagaatcaacgagtgcatcgcccagctgaaggacctgctcccggagcacctg
aaactctccaccctgggccatttggaaaaggccgtggtgctggagctgacgctgaagcac
gtgaaagccctgaacagcctgctggaacagcagcagcagcaaatcatatctctgcagaat
ggaatgcagatcggtgatcacaccaacgggagcttggagaagagcgaggagatgttccga
tccggtttccatttgtgtgccaaggaggttctgcagtacatggctagtcaagagaacgca
cgtgacctgactcctacgcacatcattaaccatctgcacaaggtggcgtcggagctgccg
cagcggccgatcagcccgcgatccgactctccttcccctgcctacaaaggccacacggtc
cgcgagaagcccatggtggcgccggttagaaagccagaaggacacaccaaaaactgcgtc
cctgtgattcagaggacatacccacatagcagtgagcagagtggcagcgacacggacacg
gacagcggctacggcggcgagttggacaaagacaagcgtgactccggtggccagcgagcg
agctactacatcaaagagggtgctgaactgaaatacggcatcaaggaggaatgggatgag
ccgcaggccaaacggcaaaggtcagactcctcagaggacgagtctctgttgggtcgcagc
gggtacgcaggcttctctgcccaccagccccctctctgcatgcccttctaccttctccct
ccagtgtcagcggctgctgccgctgctgcctacctcccagtgttggagaaatgctggtac
ccagggggcatgcccatgctgtaccccggcatcggcggttccacgccgtgcttgtctccg
gagaaactccccatgtcgcttgtcttgtcccccagagtagcgtcccccaccacttctcac
gctcatacagactctacagttctgcaccaggccctaaaacatgtgccccccttaaatctg
gaaaccaaagactga
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