Silurus meridionalis (southern catfish): 124402139
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Entry
124402139 CDS
T08004
Symbol
brpf3a
Name
(RefSeq) bromodomain and PHD finger-containing protein 3 isoform X1
KO
K11350
bromodomain and PHD finger-containing protein 3
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124402139 (brpf3a)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
124402139 (brpf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
EPL1
zf-HC5HC2H
Bromodomain
PWWP
PHD_2
PHD
FYVE_2
PHD_NSD
C1_1
Motif
Other DBs
NCBI-GeneID:
124402139
NCBI-ProteinID:
XP_046730840
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All DBs
Position
19:10465689..10479032
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AA seq
1036 aa
AA seq
DB search
MKKLRRRSCPIALSRGRSSSSNHTDQDILLRSPSPCRLNFSMSRDTLSYAQSQKIVEVEL
EGRVHLINVSDPLKIITEDEMLAQDLTECNSNKENSEQITGYAQPDHTVSSLKDKRKESK
HSGRCRRSGGQHFTHNLLSSAHHTQLVSPLPKPTFQKVDTYSPLEACPLPVAYYRYVEKC
NEELEMKAEYDMDEEDMAWLEIVNQKRVSDGHASVSPDTFELLIERLERESILESRSQVL
SQNAIDEDAFCCVCMDDECLNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRRCLQSPS
RPVDCILCPNRGGAFKQASDGRWAHVVCAIWIPEVCFANTVFLEPVEGVNNIPPARWKLT
CYLCKQRGRGASIQCHKANCYRAFHVTCAQRAGLFMKIDPVRETDVNTTTFTVKKTVFCG
NHSPLDAKLGYSEKGEIFVGGRGQRSYTLGPTVEQNQHERKKGLVTQQKKKKKNSNGLSR
KSAAPLLLVPQIPSYRLNKICTGVPVQRKNQFMQRLHNYWLLKRHSRNGVPLIRQLHSHL
QVQKTEKREPDARVQALRVELKYWQKQRQDLEKARLLIELIRKRERLKREQLKLQQLTLE
LQLTPSLVLLRSTLERLQEKDSDCIFISPVNLSEVECTGLINHIIQNVPDYLEFVSEPMD
FSTMREKLEAHKYCSVADLEADFNLMVSNCLRYNSSDTVFHKAAMQLKEVGGAILRHAQS
QALSAGFDISTGMHLPDSGIKVNSSQSCWDMVDMLLDPENRIHMSPEAQLKQLLEKLDMV
TTMCTSGARTKRLRLLRREINSIRHKLNRQQRTSRLLGGNTKKEGQKVEVPNKKINYATI
TSGLKNDLKKKDYIRESENCSTAYQNISSALPKRSRGKPSLNKVPVVEGENKKADSETKL
EPLSLVWAKCRGYPSYPAMMVDPDMPKEGILPNGIVIPVPPQDVLQLGERRQVETEDKLF
LVVFFDTKRTWQWLPMGKLHPLGIDDAVDKLRLMEGKKPNVRKSVHLAYERAMKHLSLVH
KNMNFNPTTFIGSTSL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctaaggagacgaagttgtccgattgcattgagtagaggaagaagcagttcc
tccaaccacacagaccaggatattcttctccgttctccctccccatgtagactcaacttt
tctatgtccagagacacactctcatatgcgcagtctcagaaaattgtagaggtagagctt
gagggaagagttcatctgattaatgtttctgatccactcaaaatcatcacagaagatgaa
atgcttgcacaggacctgacagagtgcaacagcaacaaggagaacagtgagcagattaca
ggctatgctcagccagaccacactgtctcctctctaaaggacaagaggaaagaaagcaaa
catagtggcaggtgtaggcgttctggtggccaacacttcacccacaaccttctgagctca
gctcatcacactcagttagtaagccctctacctaagcccaccttccaaaaggtggacacc
tactcgccattggaggcttgtcctcttcctgtggcctactaccgctatgtggaaaagtgt
aatgaggagctggagatgaaggcagaatatgacatggatgaggaagacatggcttggctg
gagattgtaaatcagaaacgtgtgtcggatgggcatgcttctgtctctccggacacattt
gagttattgattgagagattggagagggaatctatcctggagtctcgaagccaagtcttg
tcccagaatgcaattgatgaggacgctttctgctgtgtgtgcatggatgacgagtgcctt
aacagcaatgtcatcctgttttgtgacatctgcaacttggctgtacaccaggagtgttat
ggagtgccctacatacctgaaggtcagtggctatgccgacgctgtctgcagtccccctct
cggcctgtggattgcatcctttgcccaaatagaggaggtgcctttaaacaggctagtgat
ggtcgctgggcccacgtagtttgcgctatctggatccctgaagtttgctttgctaacaca
gtattccttgaacctgtagaaggagtgaataacattccccctgcaagatggaaactcact
tgctacttgtgcaagcagagggggaggggggcatccattcaatgccataaggccaactgc
taccgagcatttcatgtcacctgcgctcaacgggctgggctcttcatgaagatagaccca
gtgcgggagactgacgtcaacaccaccacattcactgttaagaagactgtcttctgtgga
aaccattctccccttgatgctaaattagggtacagtgaaaagggggaaatctttgtaggg
ggtaggggtcaaaggtcatacactttagggcctacagttgagcaaaatcagcatgaacgc
aaaaagggtttggtcacacagcaaaaaaagaagaaaaaaaattcaaatggattatcgcgc
aagtcagcagcgcctctactacttgtaccacaaattccatcctacaggcttaataagata
tgcacaggtgtgccagtacagaggaagaaccaattcatgcaaaggcttcataattattgg
ttgctaaaacgtcactctcgaaatggagttccacttattcgtcagctccactcccaccta
caggttcagaagactgaaaagagggagccagatgcgagggtgcaggcattgagggtggag
ctgaaatactggcagaagcagcggcaggacctagagaaagctcgactattgattgaactc
atccgcaagagagagaggctcaaacgtgaacagctaaaactgcagcagctgactttggag
cttcagctcacaccctccttagtactactgcgctccacactggagcgactgcaagagaaa
gatagcgattgcatcttcatttctcctgtcaatctctctgaggttgaatgtacggggctt
ataaatcacatcattcagaatgttccagattatctggagtttgtttctgagccaatggac
ttctctaccatgcgtgagaagctggaggcacataagtactgctccgtggcagatctggaa
gctgactttaacttgatggtgtctaactgcctacggtacaattcaagtgacaccgtgttc
cacaaagcagccatgcagctcaaggaagtgggtggtgctatcttgaggcatgcccagagc
caggctctcagcgcagggtttgacatttctacaggcatgcatctccctgactcaggcatc
aaagtaaactccagccagtcctgctgggacatggtggacatgcttttggaccctgaaaat
agaattcacatgtctccagaggcccagctgaaacaactgcttgaaaagttggacatggtg
acaaccatgtgtaccagtggagcgcgcactaaacgattgcgactgttacgcagggaaatc
aatagtatacgtcacaagctcaaccgccagcagcgaacttcacgactactcggtggcaat
accaaaaaggaaggccagaaagtagaagtcccaaataaaaaaattaattatgcaacaatc
acttcaggtttgaaaaatgatcttaaaaagaaggattacattcgtgagtcagagaattgc
tctactgcttatcaaaacatcagttctgcacttcccaaacgcagtcgaggtaaaccatcc
ttgaacaaggtcccagttgtggagggagagaacaaaaaggctgattcagagaccaaattg
gagcctctcagcttggtttgggctaaatgcagggggtatccttcatatcccgcaatgatg
gtagatcctgacatgcccaaagaaggaattcttcctaatggcattgtaatcccagtacca
ccgcaagacgtgctgcaactgggtgagcgcagacaggtggagactgaggacaagttattc
cttgtggtgtttttcgacacgaaaagaacttggcagtggctaccaatgggtaaactccat
ccattgggaatcgatgacgctgtggataaacttcgcctgatggaaggcaagaaaccgaat
gtacggaagtctgtacacctggcatatgaacgagcaatgaagcacctcagccttgtgcat
aaaaacatgaactttaaccccaccactttcattggaagcacttcactgtga
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