Silurus meridionalis (southern catfish): 124402165
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Entry
124402165 CDS
T08004
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
smeo04030
]
124402165
G protein-coupled receptors [BR:
smeo04030
]
Rhodopsin family
Vision
Opsin
124402165
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srw
7TM_GPCR_Srt
Motif
Other DBs
NCBI-GeneID:
124402165
NCBI-ProteinID:
XP_046730906
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Position
19:complement(10582170..10584303)
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AA seq
358 aa
AA seq
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MAEQWGEAMFAARRRGDETTREAAFTFTNSNNTKDPFEGPNYHIAPRWVYNVSTMWMLFV
VVASTFTNGLVLVATVKFKKLRHPLNWILVNLAVADLLETLLASTVSVCNQMFGYFILGH
PLCVFEGFTVACCGIAGLWSLTVISFERWVVVCKPFGNVKFDAKWAAGGIIFTWVWSAFW
TSLPMFGWSRYWPHGLKTSCGPDVFSGSEDPGVQSYMIALMITCCIIPLGIIILCYFAVL
MAIRAVAAQQKESESTQKAEKEVSRMIVVMIAAYCFCWGPYTFFACFAAANPGYAFHPLA
AAMPAYFAKSATIYNPIIYVFMNRQFRSCILQLFGKKVDDGSEVSSTSKTEVSSVAPA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcagtggggagaagctatgtttgcagccaggcgacgaggtgatgaaactaca
cgggaagcagccttcacattcacaaacagcaataataccaaagatccatttgaaggaccc
aactaccacattgccccacgatgggtgtacaatgtttccacaatgtggatgctttttgtg
gttgttgcctcaaccttcactaatggcctggtactggtagccacagtcaaattcaagaag
cttcgtcaccctctgaactggattttggtcaatcttgcagtagctgatcttttagagaca
ctgcttgccagcacagttagtgtctgtaatcaaatgtttggctactttatccttggacat
ccactttgcgtatttgagggtttcactgttgcttgctgtggtattgctggtttgtggtct
ttgactgtcatatcatttgagagatgggtggtggtgtgcaaacctttcggaaatgtaaaa
tttgatgctaaatgggccgctggtggcattatctttacttgggtctggtctgcattttgg
acttcacttcctatgtttggatggagcagatattggcctcatggcctaaagacctcttgt
ggaccagatgtattcagtggaagtgaagatcctggagtccagtcttacatgattgcactt
atgatcacctgctgcattatacctttaggcattatcattctctgctactttgctgtgttg
atggccattcgtgcggttgccgcacaacagaaggaatctgaatcaacacaaaaggctgaa
aaagaagtcagcagaatgattgttgtcatgattgctgcttattgtttttgctgggggcca
tacactttctttgcctgcttcgccgctgctaacccaggttatgcctttcacccacttgca
gcagccatgcctgcttactttgcaaaaagcgccaccatctacaaccccattatctatgtt
tttatgaaccgacagttccgttcatgcatcctgcaactctttgggaaaaaggttgatgat
ggctctgaagtgtcgtctacctcgaaaacagaagtctcctctgtggcacctgcataa
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