Silurus meridionalis (southern catfish): 124402212
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Entry
124402212 CDS
T08004
Name
(RefSeq) carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124402212
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124402212
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124402212
Protein phosphatases and associated proteins [BR:
smeo01009
]
HAD phosphatases
Fcp/Scp phosphatases
124402212
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124402212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
124402212
NCBI-ProteinID:
XP_046731010
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All DBs
Position
19:341601..350616
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AA seq
177 aa
AA seq
DB search
MEEDEGKICVVIDLDETLVHSSFKPISNADFIVPVEIDGTTHQVYVLKRPHVDQFLQRMG
EMFECVLFTASLAKYADPVTDLLDQCGVFRARLFRESCVFHHGCYVKDLSRLGRQLNKTL
ILDNSPASYIFHPENAVPVLSWFDDVDDTELLNLLPVFEELSVADDVYTKLQQLREP
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggatgagggtaaaatctgtgtggttattgatcttgatgagacgctggtacac
agctcttttaagccgatcagtaacgctgactttattgttcctgtggagattgatggaacc
acacaccaggtgtacgtcctgaagcggccgcatgtggatcagtttcttcagcgaatggga
gagatgtttgagtgtgtgttgttcaccgccagccttgctaaatacgctgacccagttaca
gatttgctggatcagtgtggagttttccgagcgagactgttccgggagtcatgtgtgttc
catcacggctgctatgttaaagatctgagtcgcctcggacgccaactcaacaaaaccctc
atcctcgataattctcctgcatcctacatcttccatcctgaaaatgcggtccccgtgttg
tcgtggtttgatgatgtggacgacacggagcttctgaatttactgccagtgtttgaagag
ctgagtgtcgctgatgacgtttacaccaaacttcaacaactcagagagccctga
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