Silurus meridionalis (southern catfish): 124402266
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Entry
124402266 CDS
T08004
Symbol
acap3b
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3b isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124402266 (acap3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124402266 (acap3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124402266 (acap3b)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
124402266 (acap3b)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124402266 (acap3b)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124402266 (acap3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PH_11
PH_21
TPR_TTI1_N
Hist_deacetyl
PH_alsin
Motif
Other DBs
NCBI-GeneID:
124402266
NCBI-ProteinID:
XP_046731124
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Position
19:complement(13199174..13248144)
Genome browser
AA seq
842 aa
AA seq
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MTVDFEECIKDSPRFRANIDEVETDVVDIEVKLDKLVKLCSGMIEAGRAYTNANKLLING
IRDLSHHCKEEMISEFLEKCGESLHEIVNYHMILFDQAQRSIKQQLHTFVKEDVRKFKET
KKQFDKVREDMEIAQVKNAQAPRNKPHEVEEASGALVVTRKCFRHLALDYVLQINVLQAK
KKFEILDSMLSFMHAQYSLFQQGYNLLDELDPYMKKLAAELDQLVINSAMEKRVMEHQHA
IIQQRTLMQDFVCDDSKVEFNVDAPNGIVMEGYLFKRSTNAFKTWNRRWFSIQNSQLVYQ
KRLKDALTVVVEDLRLCSVKPCEDIERRFCFEVVSPTKSCMLQAESEKLRQAWIQAVQAS
IASAYREITDNYYIERLDRTASPSTSSIDSTSEPRERSVRGENVLHRVQSLPGNEVCCDC
GQAEPRWASINLGILLCIECSGIHRSLGVHCSKVRSLTLDSWEPELMKLMCELGNTVINH
VYEGACEERGLKKPGPNSSRQEKEAWIKAKYVERKFLKKMCGLEALVEGGRKSHHWHVKK
CRRNNSAIAPKARHKYRHDGGGVSPANLSAAAAAAKFRRESLFCPDELDSLFSYFDTGSG
PRSPAGLSSDSGLGGSTDGSSDILVFGSVVDSVTEEECKDSEESSGEVEVEPETSDLEDV
RELHPSALLYKASQARNLPVMAEALAHGADVNSINEEDESKSPLIQAVVGGSLVACEFLL
QNGADVNQKDARGRGPLHHATSLGHTGQVCLFLKRGASQTEVDEDGQDPLSIAVQAANAD
IVTLLRLARMNEEMREADGPLGQPDASIPLSPQRVKHKEKISPRSMRSFGSFRTWLNTSP
KM
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggattttgaggagtgtattaaagactcgccccggttcagagcaaacatcgat
gaggtggagacagatgtggtcgacatcgaggtcaaactcgacaagctggtgaagctgtgc
agcggaatgatcgaggccggtagggcgtacaccaatgctaataaactccttatcaatggc
attcgtgacctgtcacaccactgcaaggaggaaatgatctctgagtttctggagaaatgt
ggagagagccttcatgaaatcgtcaactaccacatgatcctctttgaccaggctcagagg
tccattaagcagcagttgcacacgtttgtcaaggaagatgtgcgcaagtttaaggagaca
aagaagcaatttgacaaagtgcgagaggacatggagatagcacaggtgaaaaacgctcag
gctccccgcaacaagccgcacgaggtggaagaagccagtggcgcgcttgtcgtgacccgg
aaatgtttcagacacctcgccctcgactatgtgctacagatcaatgtcttacaggccaaa
aagaagtttgaaatcctagactcgatgctgtccttcatgcatgcacagtactcgctgttc
cagcagggatacaaccttctggatgaactcgacccatacatgaaaaagcttgctgctgag
ctggatcagctggtaatcaactcagccatggaaaagagagtgatggagcaccagcatgcc
atcatccaacaaaggactttgatgcaggacttcgtctgtgatgattccaaggtggaattt
aatgtggacgccccaaacgggattgtgatggagggatatctgtttaagcgctctacaaat
gctttcaaaacatggaataggcgatggttctcaatacaaaacagccagctggtctatcag
aagaggcttaaggatgctcttacggttgtcgtggaagacttgagactttgttcggttaaa
ccttgtgaggacatcgaaaggcggttctgctttgaagtggtgtcacctacaaaaagctgc
atgttgcaagccgagtctgagaagctgcgtcaggcctggattcaggctgtgcaggccagc
atcgcctcagcctacagagagatcacagataactactatatagagcgtttggacaggacg
gcgtctccctccaccagcagcatcgactcgaccagcgagccacgggagagaagtgtgaga
ggggagaatgtcctgcatcgagtacagtctctcccaggaaatgaggtgtgctgtgactgc
ggtcaggccgagccacgctgggcaagcatcaacctgggtatcctgttgtgcattgagtgc
tcaggcatccacaggagtttgggtgtacattgctccaaggtgcgctctttaacactggac
tcctgggaaccagaattaatgaagttaatgtgtgagctcggtaacacggtaattaatcac
gtctatgagggagcctgtgaagaaagaggtctgaaaaaacctggacccaacagctcaagg
caagagaaagaagcctggatcaaagcgaagtatgtggaaaggaagtttctaaagaaaatg
tgcgggttagaggcgctggtcgaaggtggcaggaagtctcatcactggcatgtaaaaaaa
tgcaggaggaacaacagcgccatcgcaccgaaagcacgacacaaatacaggcatgacggt
ggaggtgtgtcaccagctaacttatctgcagctgctgcagcagccaaatttcgcagagaa
tcacttttctgtcccgatgaactggactcacttttctcctacttcgacaccggctccggg
ccccgcagccccgcaggtctcagcagtgacagcggcctcggtggcagcacagacggcagc
tctgatatcctggtgttcggctcggtggtggacagtgtcacagaagaggagtgtaaagac
tcagaggaatccagtggggaggtggaggttgagccagagacatcagacttggaggacgtg
cgggagcttcaccccagcgcgctgctctacaaagcctcacaagcccggaacctgcctgtc
atggccgaggcgttagcacacggggcagacgtcaactctattaatgaagaggacgagagc
aaaagccctttaatacaggctgtcgtggggggttctttagtagcctgtgagttcctgttg
cagaacggagctgatgtaaatcagaaagacgcaagaggacggggcccgcttcaccatgcc
acatctttgggtcacacagggcaagtgtgtctcttcctgaagcgaggagcgtctcagacg
gaggtggatgaagacggtcaggaccctttgagcatcgctgtgcaggcagctaatgcggac
attgtgactctgttgcggttggctcggatgaacgaggaaatgcgcgaggcggacggcccc
cttggacagccagatgccagtatacctctgagccctcagcgggtaaagcacaaggaaaaa
atatcaccacggtcgatgagatcgtttgggagtttccgtacgtggcttaacacaagtccg
aaaatgtga
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