Silurus meridionalis (southern catfish): 124402278
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Entry
124402278 CDS
T08004
Symbol
asic1b
Name
(RefSeq) acid-sensing ion channel 1B isoform X1
KO
K04829
acid-sensing ion channel 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124402278 (asic1b)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
124402278 (asic1b)
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GFIT
Motif
Pfam:
ASC
Innexin
Motif
Other DBs
NCBI-GeneID:
124402278
NCBI-ProteinID:
XP_046731147
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Position
19:complement(5862295..6217589)
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AA seq
557 aa
AA seq
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MVRITCTISVTTGDEPTGGSYAGSFDDHYKRVMRSGDSDPGQYKEDGDEPEIYEEEEEEE
PPNIDLANFFDGCSLHGANHIFVENKKFGVRQGLWAVSFLAALTLFLIQVGDRIAYYVQY
DHVTMLDEREAPNMTFPAITMCNFNTFRRSQISYSDLLFMGPLIGYEDNMAPGFQLAPEP
DRQGARFSMAEFFNRTRHRMEDMLLECKFAGADCGPEHWREIFTRYGKCYTFNSGQDGQP
LRITTKGGMGNGLELMLDIQQDEYLPVWGETDETSFEAGIKVQIHTQDEPPFIDQLGFGV
APGFQTFVSCQEQRLTYLPSPWGDCRSEPIDSDFFTTYSITACRIDCETRYLVENCNCRM
VHMPGDAPYCTPEQYKECADPALDFLVERDNDYCVCDTPCNMTRYGKELSFVKIPSKASA
KYLAKKYNKTEQYISDNILVLDIFFEALNYETIEQKKAYELPGLLGDIGGQMGLFIGASI
LTILELFDYLYEVIKYKLCHCRKKSHKRSNNNDRGAVLSLDNVQCHPPCENLRTPSTYPA
NILPHHPGQGNFEDFTC
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaattacatgtacaatctccgttacaaccggggacgagcccactggggggtct
tatgcgggcagctttgatgaccactacaaacgggtaatgcggagcggcgacagcgaccca
gggcaatataaggaagacggtgatgagccggagatttacgaggaggaggaagaagaagaa
ccacctaacattgacttggcaaactttttcgatggttgttcccttcacggtgctaaccac
atctttgtggagaataagaagttcggggtgaggcagggtctctgggcagtgtcctttctg
gcagcccttactctcttcttgatccaggtgggtgaccgcatcgcctattacgtgcaatat
gatcatgttaccatgctggatgagcgcgaagcacccaacatgaccttcccagccatcact
atgtgcaacttcaacaccttccgtcggtcccagatcagctacagtgacttgctctttatg
gggcccctcatagggtatgaagacaacatggcccctgggtttcagcttgcccctgagcct
gatcgccagggtgcccgcttcagcatggccgagttctttaaccggacgcggcatcgcatg
gaagacatgctcctggagtgcaaatttgctggagcggattgtggtcctgagcactggaga
gagatctttactcggtatggcaaatgctacacattcaactctggccaggatggacagcca
cttcgcatcacaacgaaagggggcatgggcaacggtctggaactaatgctggacattcaa
caggatgagtacctgccagtgtggggagagacagatgagacgtcttttgaagccggcatc
aaagtacagatccacacccaggatgagccacctttcattgatcaactgggattcggagtg
gcgccaggctttcagacgttcgtgtcctgccaggagcagaggttgacctacctgccctct
ccatggggtgactgcaggtccgagcctattgactcagacttcttcaccacctacagcatc
acagcgtgccgcatcgactgtgagacgcgctacctggttgagaactgtaactgtcgcatg
gtgcacatgcccggagacgctccatactgcacaccggaacagtataaagagtgtgcggat
ccggctttggatttcctggtggagagagacaatgattactgtgtttgtgatacaccctgc
aacatgacacgctacggcaaagaactgtcgttcgtcaagatccccagcaaggcctcagcc
aaatacctggccaagaagtacaacaagacagagcagtacatttcggataacatcttggtt
ctggatatcttcttcgaggcgttgaactatgagactatcgagcagaaaaaggcctacgag
ctgcctggtttactaggtgatattggtggtcagatgggtctttttattggagccagtatt
ctgacaattttggagctctttgactatctttatgaggtgatcaagtacaagctgtgccac
tgcaggaagaagagccacaaacgcagcaacaacaacgaccgaggggccgtgctgagcctg
gacaacgtgcagtgccatcctccatgtgaaaaccttcgcactccctccacatatccggct
aacatcctacctcaccatccagggcagggcaatttcgaggacttcacctgctga
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