Silurus meridionalis (southern catfish): 124402309
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Entry
124402309 CDS
T08004
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124402309 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124402309 (irf6)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
124402309 (irf6)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124402309 (irf6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
124402309
NCBI-ProteinID:
XP_046731203
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Position
19:18740110..18745767
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AA seq
474 aa
AA seq
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MSVHPRRVRLKPWLVAQVDNGTFPGLVWLDREAKRFQIPWKHATRHTAQQEEENTIFKAW
AVETGKFQEGADEPDPAKWKAQLRCALNKSREFNLIYDGTKEVPMNPLKIYDVCDIPPPL
SNPGSTGSAPAYDSDGEDDDVPDTPEPPPPPYHPPVGGSPLAPPVWTSPGSSSPLQPSPQ
VWPKKEPQDVEMNAPAAMEIQPASNMDTQPICDVLFTTPETWISSLPMTDLEVQFYYRGK
EVCPALTVSNPQGCRLFYGDLGPMVNQEELFGPVSLEQLRFPSTEHITNDKQRLFTNRLL
DVMDRGLILEISAHDIYAVRLCQCKVYWSGPCGPNASAPNLIERQRRVKLFCLETFLSSV
IAHQRGQSPSLPQFDIHLCFGEEWPDGRPRERKLIMVQVVPVVARIITEMFSSDGTRSFD
SSSVRLQISVPDIKDNIVMQLKQLYRLLQNHQGNETWPLPSGGPAHLPHPLHAQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcaccctcggcgtgtgcggctaaagccgtggctcgtcgctcaggtggataac
gggacgtttccaggtctcgtgtggctcgaccgtgaagcaaagcgcttccagatcccatgg
aaacacgcgactcgtcacacggctcagcaggaggaggagaacaccatcttcaaggcgtgg
gctgtagagactggaaagtttcaagagggtgcagatgaaccggatcctgcgaagtggaaa
gctcagttacgctgcgccctcaacaagagccgcgagttcaacctaatctacgatggaacc
aaagaagttcctatgaaccccctgaaaatctatgatgtgtgtgatatccctccccccctc
agtaaccctggttccacaggttctgctccagcatatgactctgatggtgaagatgatgat
gttcctgatacaccagaacctccaccacctccatatcatcctccagtgggcgggtctcct
ctggccccacctgtgtggacttccccaggttccagctcccccctgcagccctcccctcag
gtgtggcctaaaaaagagccacaggatgtggagatgaatgcaccagcagctatggagatc
caaccagcttccaacatggacacacaacccatatgtgacgtgctgttcaccacaccagag
acctggatcagctctctgcccatgactgatctggaggtccagttttattaccgtggtaag
gaggtgtgtccagcactgacggttagtaaccctcagggctgcaggttgttttacggggat
ttgggtcccatggtgaatcaggaggagcttttcggacctgtgagtctggagcagttgcgt
ttcccgtccactgaacacatcaccaacgacaagcagcgtctcttcaccaaccgccttctg
gacgtcatggaccgcggcctcatcctggagatcagtgcacatgacatctacgccgtgcgt
ctttgccagtgtaaagtctactggtccggtccgtgcggcccgaacgccagcgcacccaac
ctcatcgagcgtcagcgccgagtcaagctcttctgcctcgagaccttcctcagcagtgta
atcgctcatcagcggggccagtctccatctttgcctcaatttgatattcacttgtgtttc
ggtgaggagtggcctgatggacgtcccagagagagaaaactcatcatggtgcaggtggtc
ccggtggtggcgaggatcatcactgagatgttcagttcagatggaactcgttcctttgac
agctccagtgtacggctacagatatctgtcccagacataaaggacaacatcgtcatgcag
ctcaaacagctgtaccgcctgctgcagaatcaccaagggaacgagacctggccactccca
tccggtgggcccgcccacctcccccaccctttacacgctcagtga
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