Silurus meridionalis (southern catfish): 124402316
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Entry
124402316 CDS
T08004
Symbol
ppfia4
Name
(RefSeq) liprin-alpha-4 isoform X1
KO
K26226
liprin-alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124402316 (ppfia4)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124402316 (ppfia4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
WD40_alt
Motif
Other DBs
NCBI-GeneID:
124402316
NCBI-ProteinID:
XP_046731215
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All DBs
Position
19:complement(11913780..12034605)
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AA seq
1203 aa
AA seq
DB search
MMCEVMPTINEGDSTSSQRGSQNGSDGESNFEQLMVNMLDERDKLLESLRETRDALVQSQ
TKLQEALHERDALQRQISSALPQEFTSLTKELSACREQLLEKEEEISELKAERNNTRLLL
EHLECLVSRHERSLRMTVVKRQAPPPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVA
LERVTTLEGQLTASNQELAMVRQGRDGKTDGNKMDSTKPAWKRLPNGSIDVHDDSTRATE
LQELLDKANKDLSTSRERANTLNSRVAELESELAVVRKELLKSEEFSVKHQRDIREAMAQ
KEDMEERITTLEKRYLAAQRETTSIHDLNDKLENELATKDSLYRQSEEKVRHLQELLEVA
EQRLQQTMRKAETLPEVEAELAQRVAALTKAEERHGNIEERLRQLESQLEEKNQELSRAR
QREKMNEEHNRRLSDTVDRLLTESNERLQLHLKERMAALEDKNALIQDLENSQKQLEEFH
HTKERLIGEIEKLRSEIDHLKRRSGAFGDGTHPRSHLGSATDLRFAVVEGQGEHFATTGV
IRRAQKGRLVALRDEPAKILPVVEQDWDRLQPSSLRSSRSHLMGSDTDLSELDDDDRDTV
FSSGDMLSPSGHSDAQTLALMLQEQLDAINEEIRMIQVERESAELRADEIESRVNSGSMD
GLNVTLRPRSTIPTSVTALSLASSSPPVSGRSTPKMASRSTAHELGVMTLPSDLRKHRRK
VTSPVEAREDKATIKCEMSPPSSPRSLKLDQINFAQLTGSLEDGRGGNKKKGIKSSFGRL
FGKKDKPQPMIKDGQMTPPVIPDFEMNIGDTMTLGKQAERDRRMKKKHELLEGARRKGLP
FAQWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKL
RLAIQEMVSLTSPSAPLTSRTSSGNVWVTHEEMENLATSTKAENEEGSWAQTLAYGDMNH
EWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRTHLKMVDSFHRASLQYGIMCL
KRLNYDRKELDRRREDCHHELKDALVWTNEHVMNWVQTIGLKEFSNNLPESGVHGALIAL
DETFDFSSLALILQIPMQNTQARQLLEREFNNLLALGTDRRLEESDDKSFRRSPSWRKRF
RPRDGQGLGMMPGSIETLPAGFRLSTMSIPSSMTVNPKKHLQPEAGPQAPQRLDPSTIRT
YSC
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaagtgatgccgaccatcaacgaaggggactcgacgagttcccagaggggt
tctcagaacggctcggatggagagtccaatttcgaacagctgatggtgaacatgctggat
gagagagacaagctgctggagtcgttgcgtgagaccagagatgctcttgtgcagtcacag
accaagcttcaggaggcccttcatgagagggatgctcttcagagacagatcagctcagcg
ctgccacaggagtttacatcactaacgaaggagctaagtgcatgccgggagcaactcttg
gagaaagaggaggaaatctctgagcttaaagcagaaaggaacaacaccaggctcctcctg
gagcatttggagtgcttggtgtcgcgtcacgaacgctcattaaggatgacggtggtgaaa
agacaggctccgccaccctccggagtctccagtgaagtggaagtgcttaaggctcttaaa
tctcttttcgagcaccacaaagccctggatgagaaggtgagggagcgactacgcgtggcc
ctggagagagtgacgacactagagggccaactgacagccagcaatcaggagcttgccatg
gtgcgccagggaagagatggaaagacagatgggaacaaaatggacagcacaaaaccagct
tggaagaggctgcctaatggctccatcgatgtccatgatgattccacacgtgctacggag
cttcaggagctgctagacaaagctaacaaagatctttccacgagtcgtgagcgtgccaac
acactgaatagccgcgtggctgagcttgagagcgagctcgctgttgtgcgcaaggagctg
ctgaagagcgaggagttcagcgtcaaacaccagcgagacatccgtgaggcgatggcacag
aaggaggacatggaggagcgtatcacaacgctggaaaagcgctacctggctgcacaacgt
gaaacaacttccatccatgacctgaatgacaagctagaaaacgagctggctaccaaggac
tcgctctatcgacagagcgaggaaaaggtgcgccatttgcaggagctattggaagtggct
gaacagaggctacagcagaccatgaggaaggctgagacactgccagaggtggaggctgaa
ctggctcagagagtggctgctttgacaaaagcagaggaacgccatggaaacattgaagag
cgtctccgacaattagagtcacagctggaggagaagaaccaggagctgagtcgagctcgt
caaagggagaaaatgaacgaggaacacaacaggcgtctgtcggatacagtggaccgcctg
ctcactgaatctaacgaacgcctgcagctccacttaaaagaacggatggcagccttggag
gataagaatgcactcattcaggatctggagaattcacagaagcagctggaagagttccac
cacactaaggaaagactgatcggagaaattgagaagcttcgctcagagattgatcatcta
aagagaaggagtggagcttttggagatgggacacaccctcggtctcatttgggcagtgcc
acagaccttcgttttgctgtggtggaaggacagggggagcattttgccactacaggagtc
attcgacgagcacaaaaaggaagattggtagcacttagggacgagccagcaaagatctta
ccggtggttgagcaggactgggaccgattacagccttctagccttcgaagtagccgttca
cacctgatggggagcgacacagacctctccgagttggatgatgatgaccgtgacaccgtc
tttagctcaggggacatgctgtctcccagtggtcactcggatgctcagacgcttgcccta
atgttgcaggagcaattggatgccatcaacgaggagatcagaatgatccaggtagagcga
gaatcagctgagcttcgggctgatgagattgagagccgtgtgaacagcggtagcatggat
ggactgaatgtcacgctgcgcccacggtccaccatccccacctccgtcactgccctctcc
cttgccagctcttcacctcccgtcagtggccgctcaactccaaagatggcatctcgctcc
actgcgcatgagctcggtgtcatgaccctgcctagtgatttacgaaagcaccgcaggaaa
gtcacttctccagtggaagctcgtgaggataaggccactataaagtgtgagatgtcgccc
ccttcctcccctcgcagtcttaaacttgatcaaataaacttcgctcagctgactggaagc
cttgaagatggacgaggcggcaacaaaaagaagggaatcaagtcctcctttggtcgcttg
tttggcaagaaggataagccccaaccaatgatcaaagatggccaaatgacccctcctgta
ataccagattttgagatgaacattggagatactatgaccctgggcaagcaggctgagaga
gaccgcaggatgaagaagaaacacgagcttttggaaggtgcacggagaaaaggccttccg
tttgcccagtgggacggcccaacggtggtctcttggcttgagctgtgggttggcatgcca
gcgtggtatgtagcggcttgccgtgccaatgtgaagagtggtgccatcatgtccgcgctg
tccgatacagagatccagagggagatcggcataagcaacccactgcacaggctcaagctc
aggctggccatccaggagatggtatcactcaccagtccctcagcaccactcacctcacgc
acctcctccggaaatgtctgggtgactcatgaggagatggagaacctggcaacctccacc
aaagcagagaacgaggaagggagctgggcacagaccctggcatatggagatatgaaccac
gaatggataggaaatgagtggctgcctagtttgggcctccctcagtatcgcagctacttc
atggagtgtctggtggatgctcgcatgctggaccacctcaccaagaaggacttgcgcaca
cacttaaaaatggtggacagcttccatagagcaagtttacagtatggcatcatgtgccta
aagaggctcaactatgacaggaaggagctcgatcgaaggagagaagattgtcaccatgaa
ctcaaagatgctctggtgtggacaaatgagcacgtgatgaactgggtgcagaccattggg
ctaaaggagttcagcaataaccttccggaaagtggcgtacatggtgccctcattgccttg
gatgagacgttcgatttcagcagcctggccctcatcctgcaaattcccatgcagaacaca
caggccaggcagcttcttgaacgagaatttaacaatcttttggcattggggactgacaga
cgtctggaggagagcgatgataaatcttttcggaggtctccatcatggagaaaaaggttc
agaccacgggatggccaaggcctgggcatgatgcccggctctattgagacattacctgct
ggcttccgtctctccaccatgtccattccctcctccatgactgtcaatcctaagaaacat
ctgcagcctgaagctggaccacaagcccctcaaagacttgacccctctaccatcaggact
tactcttgctaa
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