Silurus meridionalis (southern catfish): 124402333
Help
Entry
124402333 CDS
T08004
Symbol
hpse2
Name
(RefSeq) inactive heparanase-2
KO
K07965
heparanase 2 [EC:3.2.1.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00531
Glycosaminoglycan degradation
smeo01100
Metabolic pathways
Module
smeo_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
124402333 (hpse2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124402333 (hpse2)
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Heparan sulfate / Heparin
Enzymes
124402333 (hpse2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
124402333
NCBI-ProteinID:
XP_046731254
LinkDB
All DBs
Position
2:18125002..18169722
Genome browser
AA seq
578 aa
AA seq
DB search
MPGLFFSQMFCLALCWTFLIQSPFSSAKTAYRRHVAADKRQHFLDRMLILLDVNTRNPVR
VLNDNFLSLQVDPSILKNGWLDFLSSTRLVTLARGLSPAYLRFGGKRTDFLQFHNLKNLA
KFRGPGPDYYLKNYEDDIVRSDIALDKQKGCKLASHPDMMLELQREKAAQMQQVLLKEQL
SNLYSDVTITARSLDKLYNFADCAGLHLIFGLNALHRNPDNSWNASSALSLLKYSAGKKY
NISWELGNEPNSYRTMVARSVNSSRLAQDYIMLKTMLQSVRYYSRANLYGPNIGRPRKNA
ILLLDGFMKNGGSVVDAVTWQHFYIDRRVAKVEDFLKTRLLDTLTDQITKVLKIVKMHAP
EKRVWLGGVGPAWAGGINNLSDTFAAGLLWLNTLGISAMQGIDVVLRHSFFDYGYSHLVD
QQFNPLPDYWLSLLFKRLVGPRVLAVQVAGLQRKPRPGKVIRDKLRIYAHCTSFTNHNYV
RGSITIYIINLHRSRKKIKLAGTLRSKTVHQYLLQPFGADGLHSKSVQLNGEPLVMLDSD
TFPELKPRTLRAGRTIHMPPVSIGFYVIKNINALACRR
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggctgttcttctctcagatgttctgcttggctttgtgctggacttttctaatc
cagtctccgttttcttccgccaaaactgcgtaccggcgacacgtggccgctgataagagg
caacattttctggacagaatgttgattttactggacgttaacacgcgaaacccggtgcgg
gttctgaatgacaacttcttgtctctgcaagtcgacccttctatcctgaagaacggctgg
ttagacttcttaagttccacgcggttagtaactttggccagaggactttctccagcttat
ctgaggtttgggggcaaaaggacagactttctccagtttcataacctgaagaatttagcc
aagtttagaggaccaggaccagactattacctcaagaattatgaggatgacatagtacga
agtgacattgccctggataaacagaagggctgtaagctggccagtcaccctgacatgatg
ctggagctgcagagggagaaagcagctcagatgcaacaagttctcctgaaggagcagctc
tctaatctctatagcgatgtcacaataacagccaggtctttagacaaactgtacaatttt
gctgactgcgctggcctgcacctgatttttgggctcaatgccctgcaccggaatcctgac
aactcatggaatgcctccagtgcattgagtttgttaaagtacagcgctggcaagaagtat
aacatttcctgggagctgggcaatgagcctaacagttaccgtaccatggtagctcgttca
gtcaacagcagccgactcgctcaggactacattatgctgaaaacaatgctgcagtctgtt
cgctactacagccgggcgaatctctacggtcccaacattggccgtcctcgcaaaaatgca
atcctgcttctggacgggtttatgaagaacggtggttcagttgttgatgcagttacgtgg
caacatttctacattgaccggcgtgtggctaaagtggaggactttttgaaaacccgtctt
ctggacaccctgacagaccagatcacaaaggtgttaaagatcgtgaagatgcatgcccct
gaaaagagggtgtggttgggaggagttggtcctgcatgggctggaggcataaacaatttg
tcagacacatttgcagctggacttttgtggctaaacactcttggcatttctgcaatgcaa
ggaatcgatgtagtacttcgacactctttttttgactatggttacagccatctcgtggac
caacaattcaatcctctacctgattactggctgtctctgctttttaagcgtttggtgggc
cccagggtgctggcagtacaagttgctgggctccaaagaaagccacgtccaggaaaagtg
atccgagacaagttacgcatttacgcacactgtacaagctttaccaatcacaattatgtc
agaggctccataacaatctacatcattaacctgcatcggtcgcggaagaaaataaagctg
gctgggacattacgaagtaaaacagtacaccaatacctgttacaaccttttggtgctgat
ggtcttcactcaaagtctgtgcagctgaatggagaacctttggtcatgttagacagtgac
acattccctgagctaaagccacggacacttagagcaggacgaacaatacacatgcccccg
gtttctatcggcttctacgtcatcaagaacatcaatgccttagcttgtcgcagataa
DBGET
integrated database retrieval system