Silurus meridionalis (southern catfish): 124402334
Help
Entry
124402334 CDS
T08004
Symbol
cacna2d3
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04260
Cardiac muscle contraction
smeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124402334 (cacna2d3)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
124402334 (cacna2d3)
04261 Adrenergic signaling in cardiomyocytes
124402334 (cacna2d3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124402334 (cacna2d3)
Ion channels [BR:
smeo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124402334 (cacna2d3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
124402334
NCBI-ProteinID:
XP_046731252
LinkDB
All DBs
Position
19:complement(17403683..17443294)
Genome browser
AA seq
1086 aa
AA seq
DB search
MRRRLQSAVELRVRLVLFWLALGSAVAARGSQHGIPLGVVKLWASAFGGEIKSIATKYSG
SQLLQKKCKEYERTVQTEEADGAKLVQSISEKMAEMFRSKSQAAQRLVEAAEEAHLQHEE
NPELQYEYFNAVLINEVDEDGNSVELGGEFILEPNDHFNNLSVNLSLSVVQVPTNMYNKD
PDIVNGVYWSEALNKVFVDNFEKDPSLIWQYFGSAKGFFRQYPGVKWHPDEHGVISFDCR
NRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNQEIH
YVEPCLNGTLVQADKTNKDHFRSHLDRLFAKGLGLLGDALTEAFTILSEFNQAGRGSECS
QAIMLVTDGATEMYDDVFEKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGYFSQIS
TLADVQENVIRYLHVMSRPKVIDHKHDTVWTEAYVDQALAQAHKLSARHGPNPMTTVAMP
VFSTKNETKNQGILLGVVGIDIPIQDLMKTVPKHKLGIHGYAFAVTNNGYILMHPDLRHL
YQNGQKRRKAQYSSVDLSEVEWEDSDNYLRNAMVNRKTGTFSMDVKRTVDNGKRVLSMHN
DYYFTDIEGTPYSIGVALSQGHGKQFFKGNVSLEAGLRDLDQPGVALANEWTYCNTDEHH
EHRYLSQVQAIKLYLTGRKPHLKCDRELIQQVLFDAVITAPLKTYWTGLALNKSENPDKG
VEIAFLGTRTGLSRTNLFVVPEQLTNQNLLRGEDNEGVFNADHFPLWYKRAAEQVPGTFV
YSIPFSAAQDNKSVVLASTAIQLQDDRKSPIVASVGIQMKLEFFQRKFWTASRQCNALDG
KCSISCDNEDIKCYLIDNNGIILVSEDHSQTRLFFGEVEGAVMNKLLLMGSFKRITLYDY
QALCKEYVGSSDSARTLLNPFSAVKWLISEIILFLLEFNLYSWWSWDSSAKADRVHRRAM
MVPCDMEYPVFVSERTIKETAGSIDCDGCVRTFVIQQIPSSNLFMVVVENKCDCSSTPPV
SMEPVEIIYNESLKCEMLKFQKDRKRPDSCHPFHSEENAMECGSAAGLTPTLTAALIPLL
IILISR
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggcggctgcagagcgctgtggagttgcgcgtgcgcttggttctgttctggctc
gcgctgggctcggcggtggcggcgcgcggatcacagcacgggattccactcggagtagtt
aaactgtgggcttcagcattcggtggtgaaatcaaatccatcgccactaaatactccggt
tcacaactactgcagaagaaatgtaaggagtacgagcgcacagttcagacagaggaagca
gatggagccaagctggtgcagagcatctctgagaaaatggctgaaatgttccgcagcaaa
tctcaagccgcacagaggctggtggaggcggcggaggaggcgcatttacagcacgaggag
aatcccgagctgcagtatgagtacttcaacgcggtcctaataaacgaagtggatgaggat
gggaacagcgtggagctgggaggggagttcatcttggagccaaacgatcactttaacaac
ctgtcagtaaacctcagtctgagcgtagtgcaggtccctaccaacatgtacaacaaagat
cctgatatagtgaatggtgtgtattggtctgaggctctgaataaagtgtttgtggataat
ttcgagaaggacccttcactcatctggcagtattttggaagtgctaaaggatttttcaga
caataccctggagtgaagtggcatcctgatgagcacggagtcatctcattcgactgccgc
aacagaaaatggtacatccaggcagctacgtctccgaaggatgtggtgattctagtggac
gttagtggaagtatgaagggtctccgacttaccatcgcccggcagactgtgtcctccatc
ctggacacgctgggagacgatgacttcttcaacatcattgcttacaatcaggagattcat
tatgtggaaccgtgtttgaatggaactctggtgcaggctgacaaaaccaataaagatcat
ttccgatctcatctggaccgactgtttgcgaaaggtctcgggctgctgggagacgctctg
actgaagccttcaccattctcagtgagtttaaccaagcaggccgtgggagtgagtgcagc
caggccataatgctcgtgacggacggagccactgaaatgtatgatgacgtttttgaaaag
tacaactggcccgagcggaaggtgcgcattttcccctatctgattggacgagaatcagct
tttgcagataaccttaaatggatggcatgcgccaacaaaggctattttagtcagatctcc
accctggccgatgttcaggagaatgtaataaggtaccttcatgtcatgagtcgtccaaaa
gtcatcgaccacaagcacgacacggtgtggactgaggcctacgtggaccaagcgctcgct
caggctcataagctttctgcacgccacgggccaaatcccatgaccacggtggccatgcct
gtgttcagcacaaagaatgagacgaaaaatcagggcattctcctgggtgtagtgggaata
gacattcctattcaagacctgatgaaaactgtcccgaaacacaagctgggaattcacggt
tatgcatttgccgtcaccaataacggctacatcctcatgcatccagacctccgacatctg
taccagaacggtcagaagagacggaaggcccagtacagcagtgttgacctgtccgaggtg
gagtgggaagactctgacaattatctcaggaacgccatggtgaacagaaaaaccggtacc
ttctccatggatgtgaagaggacggtggataatgggaaacgagttctatcaatgcacaac
gattattacttcaccgacattgaaggaactccatacagtattggagtggctttgtctcaa
ggccatgggaagcagttctttaagggaaatgtttcactggaagcgggtctgcgtgatctg
gatcagccgggtgtggctctggcaaatgagtggacgtactgcaacaccgacgagcatcac
gagcaccgctacctctcgcaggttcaggccatcaaactctacctgactggccgcaaacca
catctcaagtgtgacagggagctgatccagcaggttctgttcgatgccgtgatcacagcc
ccgctcaagacatactggactggccttgctctcaacaagtcagagaatcctgataaagga
gtggagatcgctttcctcggcactcgcactggtctctccagaaccaacctgtttgttgtc
ccagagcagctgaccaatcagaatctgctgaggggggaggataacgagggcgtctttaat
gcggatcactttcccctgtggtataagagagcggctgagcaagtacccggaacatttgtc
tactccattccttttagtgcagcacaggataataaaagtgtggtattagccagcactgct
atccagctccaggatgacaggaagtctcctatagtggcctctgttgggattcagatgaaa
ctggaattctttcagaggaagttttggacagcgagtcgacagtgtaacgccctggacggg
aaatgcagcatcagctgtgacaatgaggatattaaatgctaccttattgacaacaacggc
atcatcctggtgtctgaggatcattctcagacgaggttgttctttggagaggtggagggg
gccgtcatgaacaaactgctcctgatggggtcttttaaacggattactctgtatgattat
caggctctgtgtaaggagtatgtaggcagcagtgacagtgcacgcactttactgaatcca
ttctctgctgtgaagtggctcatcagtgaaattatcctattcctgctagagtttaacctc
tacagctggtggagttgggactcgagtgcaaaagctgacagggtgcacaggagggcgatg
atggtgccatgtgatatggagtatccggtgtttgtctctgagcgcaccatcaaagagacg
gctggcagcatcgactgtgacggatgtgtcaggacgtttgtgatacagcagatccccagc
agtaacctcttcatggtcgttgtagagaacaagtgtgactgtagctctacccctccagtt
tccatggagcccgtcgagattatttacaacgagtccctgaagtgtgagatgctaaaattt
cagaaggatcgtaaacgtcctgattcctgtcaccccttccattctgaggaaaacgccatg
gagtgtggctcagccgcgggccttactcccacgctaactgccgctctgattcccctcctg
atcatccttatttccaggtaa
DBGET
integrated database retrieval system
