Silurus meridionalis (southern catfish): 124402421
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Entry
124402421 CDS
T08004
Symbol
slc6a1b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1b
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124402421 (slc6a1b)
Transporters [BR:
smeo02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
124402421 (slc6a1b)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
124402421
NCBI-ProteinID:
XP_046731408
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Position
19:complement(7409268..7422876)
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AA seq
598 aa
AA seq
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MATNGAKASDGHVLTEVNAAPAANDKPKTLVVKVQKKELPDRETWAGKFDFLLSCVGYAI
GLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFFLECSLGQYTSIGGLGVWKLAPMF
KGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTADLPWKSCNNPWNTEQCFSNYSLANT
SNMTSAVVEFWERNVHQLTDGLEKPGEIRLPLAITLAIAWVLVYFCIWKGVGWTGKVVYF
SATYPYFMLLILFFRGVTLPGAKEGILFYVTPNFEKLKESEVWLDAATQIFFSYGLGLGS
LIALGSYNPFNNNVYKDSVIVCCINSFTSMFAGFVIFSIVGFMAHITKRSIADVAASGPG
LAFLAYPEAVTQLPVSPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPRVLRGRREI
FIAVVCFVSYIIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECVSISWFYGVNKFYG
NIEEMIGYKPCIWWKLCWVVFTPLIVAGVFLFSAIQMVPLTMNNYVFPKWGQGVGWCMAM
SSMVLIPGYMVYMFLTLKGSYKERLRIMIQPMVSVKSQENGPEQQPESVNAANDEAYI
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaacggcgcgaaagcctccgacggacacgttctaacggaggtgaacgcggcg
cccgcggccaacgataagcccaagaccctggtggtcaaagtgcagaagaaagagcttccg
gaccgggagacgtgggccggcaagttcgactttctgctctcgtgtgtgggttacgccatc
gggctcggaaatgtgtggcgctttccttatctgtgcggcaagaacggaggaggggccttt
ttgattccctattttctgacactcatattcgctggggtgcccttgttctttctcgagtgt
tctctcggtcagtacacctccatcggtggactcggagtgtggaaactagctccaatgttc
aaaggtgtcggccttgcggcagcagtcttatccttctggcttaacatctactatatagtc
atcatttcctgggccatttactatctatacaactctttcaccgcagacctcccatggaaa
tcctgcaacaacccctggaatacagagcaatgcttttccaactacagcttggcaaacacg
tctaacatgaccagcgccgtcgtggagttttgggaacggaatgtgcatcagctcacggat
ggtctggaaaaaccaggagagatcagattgccactggcaataacactggccatcgcatgg
gtgctggtctacttttgtatctggaaaggtgtgggatggactggaaaggtggtctatttt
tccgccacatatccatacttcatgctgcttatcctgttcttccgtggagttacgctacct
ggagctaaagagggcattttgttctatgttacacctaactttgaaaagctgaaggagtca
gaagtgtggcttgatgctgccactcaaattttcttctcctacggactcggcctcgggtct
ctgatcgcactcggaagctacaaccccttcaacaacaacgtttacaaggactctgtcatt
gtatgctgcatcaactctttcaccagcatgtttgctggatttgtcattttctccattgtg
ggcttcatggctcacattacaaagaggtctattgctgatgtagctgcatcaggtccaggc
ttggcatttttagcttacccagaggctgttactcagctgcctgtttcaccactttgggca
attctgttcttttccatgctgcttatgcttggaattgacagtcagttctgtacagtagag
ggtttcatcactgccttggtagatgaatttccccgtgtattgcgtggacgacgagaaatc
ttcattgctgtcgtttgctttgtgtcttacatcattggactgtcaaatatcacgcagggt
ggcctctacgtgttcaagcttttcgattactactctgctagcggaatgtgtttgctcttc
ctggtgttctttgagtgtgtctccatatcctggttctatggtgtcaataagttctatgga
aatattgaagagatgattggatacaaaccttgcatttggtggaaactatgttgggtggtg
ttcacacctttgattgtagctggtgtgttcctgttcagtgcgatccagatggttcccttg
accatgaataattatgtgttcccaaagtggggacagggtgtaggctggtgtatggccatg
tcttctatggtcttaattcctggctacatggtctatatgttcctaacattaaaaggctcc
tataaagagcgcctccggataatgattcaacctatggtttcggtcaaaagtcaagaaaat
gggcctgagcagcaacctgagagtgtgaatgcagccaacgatgaggcatacatctaa
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