Silurus meridionalis (southern catfish): 124402445
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Entry
124402445 CDS
T08004
Symbol
cacna2d2b
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2b isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04260
Cardiac muscle contraction
smeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124402445 (cacna2d2b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
124402445 (cacna2d2b)
04261 Adrenergic signaling in cardiomyocytes
124402445 (cacna2d2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124402445 (cacna2d2b)
Ion channels [BR:
smeo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124402445 (cacna2d2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
Cache_3-Cache_2
VWA_CoxE
Fe_dep_repress
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
124402445
NCBI-ProteinID:
XP_046731451
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All DBs
Position
19:17840607..17880468
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AA seq
1095 aa
AA seq
DB search
MAIRTRSFSAVCLLTVQLIILIFSVPWSGVESLTFPQHYTIMHWARRIEQEIDRVLQHIS
GAQQLKGLYTEKRRQYTLVRNNPREIVENVASDIEKLLSKKKKALEKLATEAERVQTAHR
WQDGIKEWEIEYYDSKAEMDYDGEEMESQMSLKLEFVYDPNFKNNVNYSYTAVQIPTDIY
KGAPVILNELNWTQALERVFMENSREDPSLLWQAFGSATGVTRYYPATPWRAPDKIDLYD
VRRRPWYIQGASSPKDMVILVDVSGSVSGLTLKLIKASVTEMLDTLSDDDYVNVARFNEK
AEAVVPCFKHLVQANVRNKKIFKEHVAQMQAKGTTDYKSGFHFAFNQLLNKTNVPRANCN
KIIMLFTDGGEDRAQDIFEQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGYYFEIR
SICAIRINTQEYLDVLGRPMVLAGRNAKQVQWTNVYQDALGLGLVVTGTMPVFNLTMDGN
SQNQLILGVMGVDVHLDELKRLAPQYNLGANGYIFAIDPNGYLLFHPNLQTKVVNLPEPM
TLDFLDAEVEDGNKQEIRRQMIDGQAGEMTIKTLVKSMDERYIDEAVRTYTWTPINDTDY
SLGLVLPSYREYYIQADLSDVMLQLQYLQSLLPSSFESAGHVFLAPREYCKRLHIAENNT
QFLESFLSLMVEITPETEDCDQGLIHNAILDSGIVWQLATKAWKNKDLNTYGFLALFAST
EGGVTRVYPNTAAESWDEDLEPLNSNFYRRSLDNKGYIFRAPTRTSLEDPLITENGTVGI
LVTTAVEVTVQGKTLKPAVVGVKLDLEAWVDKFKILASNVSDSRQGSHKCGPTRSCEMDC
EVNSDDLLCYLIDDGGFLVMSNQRDHWKKVGLFFGDVDPYLMHALYNNSIYARRQTFQYQ
STCEPTASSRTGAATRHLFIPSIADLLNLAWWTSAFAWSVMQQIFYGLAYNTWFNTGDFA
FAEDTRGSSSCVTIQSQFFFTNTTNSFNVLQDCGNCSRLFHAKRIENTNLLFVVAETLPC
SSCEIEKLTQVKTEFQEEIPCDVLSSARYRKGPEKCFDYNAMENTSECGRAHSLRCPIGI
HILFQLMLLYLAVRS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggcgatacggactcggtccttcagcgccgtgtgtctgctaaccgtccagctcatcatc
ctgatcttcagcgtgccgtggagcggggtggagagcctcaccttcccgcagcattacacg
ataatgcattgggctcggaggatagagcaggagattgaccgagtcctgcagcacatcagt
ggagcgcagcaacttaaagggctgtacactgaaaagagaaggcagtacaccctcgtcagg
aacaaccccagagagatagtggagaacgtggcttcagacatcgagaagctgctgtccaag
aagaagaaggcgctggagaaacttgcaacggaagcagaaagagtgcagactgcacatcga
tggcaggacggcatcaaggagtgggaaattgagtactacgactccaaggcagagatggat
tacgacggggaggagatggagtctcagatgtctctgaaattggagtttgtttatgacccg
aatttcaaaaacaatgtaaactactcgtacacggccgtgcagatcccaactgacatctat
aaaggagctccggtgatcctgaatgagctgaactggactcaggcattggagagggttttt
atggagaacagtagagaagacccctctctgctctggcaggcttttggaagtgccactggt
gtcaccaggtattacccagccacaccgtggagagcgcccgataagatcgacctgtacgac
gtgagacggagaccctggtacatccaaggagcctcatcccctaaagacatggtcatcctc
gtggatgtgagtggcagtgtgagtggtttaactctgaagctgattaaagcctcagtaaca
gaaatgctggacacattgtcagacgacgattacgtaaatgtggcacggttcaacgagaag
gcggaggcggtggtgccatgctttaaacacttggtccaggcgaatgtgaggaacaaaaaa
atctttaaagaacacgtggctcagatgcaggccaaaggcacgacagattacaaatcagga
ttccacttcgcattcaaccagctgctcaacaaaacgaacgtccccagagccaactgtaat
aaaataatcatgctgtttacggacggtggtgaggacagagctcaggacatcttcgagcag
tacaactggcccaacaagacggttcgagtgttcacattctcagtggggcagcacaactac
gacgtcacgccgctgcagtggatcgcctgcgctaacaaaggttactattttgagatccgc
tccatctgcgccatcaggattaacacacaggagtatttagacgtcctcggacgccccatg
gtcttggctgggcgaaatgccaagcaggttcagtggaccaacgtttatcaggacgccctg
ggtttggggttggtggtgaccgggacgatgcctgtctttaatctcactatggatggaaac
tcacagaatcagttgatcctgggagttatgggcgtggacgttcacctggatgaactgaag
aggcttgcaccgcagtataatctgggagccaatggctacatttttgccatcgacccaaat
ggatatctactttttcatccaaacctgcagaccaaggtggtgaacctgcctgaacctatg
actctggatttcttagatgccgaagtggaagacggcaataaacaggagatccgaaggcag
atgattgatggccaagcaggtgagatgactatcaagacccttgtcaagtcaatggatgag
cgatatatagacgaggctgtacggacttacacttggacccccatcaacgacacagactac
agtctgggcctggtattaccttcataccgcgagtactacatccaggctgacctgagtgac
gtcatgctccaactgcagtacttgcagtcactgttgcccagctcttttgagtcagctgga
catgtcttcctggccccaagagaatactgcaagcgtcttcacatcgctgaaaacaacacc
caatttctagagagcttcctgtcactgatggtggagatcacaccggagacagaggactgt
gaccaaggcctgattcataatgcaattttggattcggggattgtctggcagctggccacc
aaggcctggaagaacaaggacctgaacacgtacggcttcctggcattgttcgcttctact
gaggggggtgttacgagagtgtatcctaacacagcggcagaatcttgggatgaagattta
gagccactgaattccaacttttaccggcgcagtctagacaataagggttacatcttcaga
gccccaactcgcacctctttggaggacccactcatcacagagaacggcacggtagggatc
cttgtcacaactgctgtggaggttacggtgcaaggcaaaacactaaaaccagcagtggtg
ggggttaagctggatttggaggcgtgggttgacaagttcaagattctggccagcaacgtg
tctgacagcaggcaaggatctcacaagtgtggtcctaccagatcatgtgagatggactgc
gaagtaaacagtgatgacctgctctgctacctgattgatgatggtggctttctggtgatg
tcaaatcagagagatcactggaaaaaggttggtttgtttttcggagatgtagatccttat
ctaatgcacgctctctataataactccatctacgcccggaggcagacgttccagtaccag
tctacatgtgagccgactgccagcagccgcacgggagctgcaacacgccacctcttcatt
ccctccatcgctgacttgctcaatttggcatggtggacatcagcatttgcttggtctgta
atgcagcagatcttctacggtcttgcatacaacacctggtttaacacaggtgattttgcc
tttgctgaagataccagaggaagcagcagctgtgtgactattcagagccagttcttcttc
accaacaccaccaactcgttcaacgtgctgcaggactgtgggaactgctccaggttattc
catgccaagaggatagaaaacaccaacctgctctttgtggtggccgaaactcttccctgc
agttcctgcgagattgagaaactcacacaagttaagactgagtttcaggaggaaattccc
tgtgatgtgttgagctctgcccgataccggaaaggacccgagaagtgttttgattacaat
gctatggagaacacgtcggagtgtgggcgggctcactctttgcgctgtccaatcgggatc
cacatcttgttccagttaatgttactttacctcgccgttcggtcttaa
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