Silurus meridionalis (southern catfish): 124402495
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Entry
124402495 CDS
T08004
Symbol
si:dkey-33c12.3
Name
(RefSeq) vimentin
KO
K04572
neurofilament light polypeptide
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124402495 (si:dkey-33c12.3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124402495 (si:dkey-33c12.3)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124402495 (si:dkey-33c12.3)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
124402495 (si:dkey-33c12.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF1664
Phage_GP20
DUF5767
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
124402495
NCBI-ProteinID:
XP_046731523
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All DBs
Position
2:complement(20346309..20349415)
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AA seq
381 aa
AA seq
DB search
MSLISSSFSLSRRWDNHSSPYRISQMPFTSSRRLLKSEPMRFWEPNELSVVCTELVGLRA
QEREELVELNDRFVSYIEKVHYLEQQNRMLMVQLEALHGMQTQPSRLQQLYRQEAQELRQ
QLHLETQDKEHVEVRRDKLRVEQEQVEKHWQDEVRRRERAEDELQRARDEADRTTLLSSD
AEVRVISLAQELAFLKQVFAEEREGLKVQLQVSRLSVEPDLNRPDLSAALREIRAQYESL
ARRNMQTAETWYQGKVANVAQAADKQQEAVRLVREETAKHRQLLLTCSNEVETLQSVINS
LNSQLRELEETQSEEVAKYQGRINHLERDIAEAKEEMARYLKEYQDLLNVKMALDIEIAA
YKQLLEGEEIRLTYCSVPVLA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaatttcctcctccttctcactgagcaggcgctgggacaaccattccagccct
taccgcatctcccagatgcccttcacttcttctcggcggctgctgaagtctgagcctatg
cgcttctgggaaccaaatgaattgagtgtagtgtgtacagagctggtgggactgagagct
caggaaagagaagagttagtagagttaaatgaccgctttgtctcctacatcgagaaggtg
cattatttggagcagcagaatcggatgctcatggtgcagctggaagccctgcatggcatg
cagactcagccatctcgactgcagcagctgtacaggcaggaggcacaggaacttcgccag
cagctgcaccttgagactcaggacaaggaacacgttgaagtgcggagagacaagctgcga
gtggagcaggagcaggtagagaagcactggcaggacgaagtgcggcggcgtgagcgggcc
gaggacgagctgcagcgtgccagggatgaggcagacagaacaacacttttgagcagcgat
gcggaggtgagagtgatttctttggcgcaggagttagcctttctgaagcaggtgtttgca
gaagagcgggaggggctgaaggtgcagctgcaggtgtccaggctcagcgtggagcccgat
ctgaacaggccagacctctctgccgccctgagagagatccgtgcccagtatgagagcctg
gccaggcgcaatatgcaaaccgccgaaacctggtaccagggaaaggtggccaacgtggca
caagcagccgataagcagcaggaggcagtgcgcttggtacgcgaggaaacggccaagcac
cgtcaactgctgctcacctgctccaatgaagttgaaactctgcagagtgtcatcaactca
ctaaactcacagctccgagagctggaggagacccagagcgaggaggttgccaagtatcag
gggaggataaatcatctggagagggatattgctgaggctaaagaggagatggcacgctat
ttaaaggaatatcaagatctgttgaacgtgaagatggccctggacattgaaattgcagca
tacaagcagctgcttgagggggaggagattcgtctgacgtactgctctgtgcctgttttg
gcataa
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