Silurus meridionalis (southern catfish): 124402643
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Entry
124402643 CDS
T08004
Symbol
cxxc1b
Name
(RefSeq) CXXC-type zinc finger protein 1b isoform X1
KO
K14960
COMPASS component SPP1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124402643 (cxxc1b)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124402643 (cxxc1b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
124402643 (cxxc1b)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
124402643 (cxxc1b)
COMPASS/SET1 complex (yeast)
124402643 (cxxc1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
124402643
NCBI-ProteinID:
XP_046731749
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Position
19:10489798..10495184
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AA seq
563 aa
AA seq
DB search
MDSEFSDMDQVAALDNSSIEEEKPLYCICRKPDINCFMIGCDNCNEWFHGHCINVTEKMA
KGIREWYCQQCQEMDPSLELKYRSKKSREKEIEPERIEKRSCSLDFKLDKRRGSKVKRSA
RMCGECEPCRRTEDCAQCDFCKDMKKFGGPNKIRQKCRLRQCVVRARKMLRVRDEEYFLH
ERTENRMHRDRRYSDDYNDVEMELYSQYKDQNMPWGSEDDEGLVYSPAHCKKAIKVKHVK
RREKKFDKKKESRRHKQKQKHKDRTRHSEKSDCRYTGDLHQCLGPSCIELARPNSKYCSE
DCGMKLAANRIYEILPQRIQQWQQSPCIAEEQGRKQLERIRKEQQAARMRLAEMERRFHD
LEGIIAKAKQQVVQQDEEVNEMENEDTDLQIFCVSCSHPINPKVAMRHMERCYAKYESQT
SFGSIFPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPVDEVCGCPLVRNVF
EPTGEYCRMSKRRCNRHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAMTNRAGLL
ALMLHQTIQHDPLTTDLRSNKDR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgaattctcagatatggaccaagtggcagcattggacaacagcagtatagaa
gaggagaagcctctgtactgcatttgtcggaagccagacatcaattgtttcatgattggc
tgtgataactgtaacgagtggtttcatggacattgcataaatgtgactgagaaaatggcc
aagggtatcagagagtggtattgccagcagtgtcaggaaatggatccctctctggaatta
aaataccgctcaaagaagtcgcgtgagaaagagattgaaccagagagaattgaaaaacga
tcatgttctttagactttaaactggacaagcgccgtggatccaaagtgaaacggtccgca
cgcatgtgtggtgagtgtgaaccctgcagacgtactgaagactgtgcgcagtgtgacttc
tgcaaggacatgaagaaatttgggggcccgaacaaaatccggcaaaaatgtcgcctgcgg
cagtgtgtagttcgtgcaaggaaaatgctgcgtgttcgagatgaggagtatttcctgcac
gagaggacagaaaataggatgcacagagacagacgatactcagatgattataatgatgtt
gagatggagctgtactcacaatacaaggaccagaacatgccatggggcagtgaggatgat
gaaggtctagtttacagccctgcccactgcaagaaagctataaaagtcaagcatgttaaa
cgcagagagaagaaatttgacaaaaagaaggagtcccgaaggcacaagcaaaaacaaaag
cataaagaccgtacaaggcacagtgaaaaaagtgattgccgttacactggagatttgcac
cagtgcttgggacctagctgtattgaattggcacgtcctaactcaaaatactgctccgag
gactgtggcatgaagctagcagccaatcggatctacgagattcttccacagcgcatccag
cagtggcagcagagtccgtgcatcgctgaggaacaaggcaggaagcaactggagcgaatt
cgaaaggagcagcaggctgctcgcatgcgacttgctgaaatggagcgccgctttcatgac
ctagagggaatcattgctaaagccaagcagcaagtggttcagcaggatgaggaggtaaat
gagatggagaatgaggatacagatctccaaatcttttgtgtatcttgcagtcaccccatt
aaccctaaagtagcaatgagacacatggagaggtgttatgccaagtatgaaagccagacg
tcttttggctctattttcccaacacgaatagaaggagcaacaagacttttttgcgatgtg
tataaccctcagagcaaaacatactgcaagaggcttcaggttttatgtccggaacattcc
agagaccccaaggtgccagtggatgaagtgtgtggatgtcctctagtgcgcaatgtcttt
gagcccacgggagagtactgcagaatgtctaagcgcagatgcaacagacactattgctgg
gagaaactcagacgagcagaagtagatctcgagcgtgttcgagtgtggtacaagttggat
gagctgtttgagcaggaacgtaacgtaagaacagcgatgactaacagagccggactgctg
gctctcatgttgcaccaaactattcagcatgatcctctgaccaccgatttacgcagcaac
aaagacagatag
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